| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2898 |
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| Symbol | |
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| ID | 5200255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3185284 |
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| End bp | 3186153 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582448 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001263388 |
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| Protein GI | 148555806 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.933474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.399957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA TCGGAGTCGT CGGGGCGGGG CAGATGGGCG CGGGGATCGC GCAGATCGCG
GCCCAGGCGG GGTTGAAGGT GCTGCTGTCG GACGTGTCGG TCGACGTTGC CGCCAAGGGC
AAGGCCGGGA TCGTCAAGCT GCTCGACAAG GCGGTCGAGC GCGGCAAGCT CGACGCCGGC
AAGCGCGATG CCGCCGTCGA CCTGATCGAG CCGGTCGGCG ACCTGTCGGC GATGCGCGCC
GCCGACCTGA TCATCGAGGC CGCGACCGAG CGCGAGGCGG TCAAGCGCAC CATCTTCGAG
ACGATCGGCA AGGTGCTCGC CCCCCACGCG ATCCTCGCCA CCAACACCTC GTCGATCTCG
ATCACCCGGC TGGCCCAGGC GTCGACCGAT CCGGCGCGCT TCATCGGCAT GCACTTCTTC
AACCCGGTGC CGCTGATGCC GCTGCTCGAG CTGATCAAGG GCCTCGCCAC CAGCCCCGAA
GCGGTCGAGG CCGCCGAGGA ATTCGGCCGC CGCACCGGCA AGACGACGAT CCTCGCCGCC
GACAGCCCCG GCTTCGTCGT CAACCGCATC CTGCTGCCGC TGCTCAACGA GGCCTTCTTC
GCGGTGGGCG AGCGGCTCGC CTCGATCCCC GACATCGACG CGGGCGTGAA GCTGGGCCTC
GGCCATCCGA TGGGCCCGCT GACGCTGGCC GACATGATCG GCCTCGACAC GCTGATCGAG
GTGCTGCGCG TGCTCCAGTC CGATTTCGGC GATCCCAAAT ATCGCCCCGC CCCGATCCTG
TCGAAGCTGG TCGAGGCCGG CTGGCTCGGC CGCAAGACCG GCAAGGGCTT CTACGACTAT
TCGGGCGAGA CCCCGGTCCC GAGCTTCTGA
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| Protein sequence | MDIIGVVGAG QMGAGIAQIA AQAGLKVLLS DVSVDVAAKG KAGIVKLLDK AVERGKLDAG
KRDAAVDLIE PVGDLSAMRA ADLIIEAATE REAVKRTIFE TIGKVLAPHA ILATNTSSIS
ITRLAQASTD PARFIGMHFF NPVPLMPLLE LIKGLATSPE AVEAAEEFGR RTGKTTILAA
DSPGFVVNRI LLPLLNEAFF AVGERLASIP DIDAGVKLGL GHPMGPLTLA DMIGLDTLIE
VLRVLQSDFG DPKYRPAPIL SKLVEAGWLG RKTGKGFYDY SGETPVPSF
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