Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2878 |
Symbol | |
ID | 5200122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3157446 |
End bp | 3159041 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582428 |
Product | hypothetical protein |
Protein accession | YP_001263368 |
Protein GI | 148555786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0424651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGGT CCACACCGCC TCTGACGCCG CCGTCCGGCT GGTGGACGCG ACCCTGGTAT ATCGCCGTCC TCGCGATCAT ATCGATCATC CCGCTGATCC GGCCCGAGGT TCCCCCGCTG GTCGACCTGA TGGGACATAT GGGGCGCTAC CGGGTCGAGC TGTCCGATCC CTCCTCGCCG CTGCTCACCG ACTATTTCAG CTTCCAATGG GCGCTGATGG GCAATCTCGG CGTCGACCTG CTGATCGTGC CCATGGCCAA GCTGTTCGGG CTCGAGCTGG GCGTGAAGCT GATCGTCATG ATGGTGCCGC CGCTGACGCT GACCGGCTTC CTGCTGATCG CGCGCGAGGT CCATGGCCGG CTGCCGGCGA CGGCCGGGCT GGTCGCGCCC TTCGCCTATT GCTGGCCGTT CCAGTGGGGC TTCATCAACT ATGTGCTGGC GATGGCGTTC GCGCTCAACG CCTTCGCGCT GTGGCTCTAT CTGGCGCGGA TGGGGCGGAT CCGGCTGCGC GCGATCCTGT TCGTGCCGAT CGGCTGCCTG GTCTGGCTGG CGCACGGCTT CGCCTGGGGC GTGCTCGGCC TGCTCGCCTT CTCGGCCGAG ATCGTGCGGA TGCGCGACGT CGAGGGGCGC GGCTATGCCG AGGCGCTGTG GCGCGGCGCG CTCCACTGCC TGCCGCTCGC CCCGCCGATG CTGCTGATGC TGCTGTGGCG ATCGGGCGAC GTGCAGGGGG AGACCGCCGA CTGGTTCAAC TGGAAGGCCA AATATGTCTA TCTGGTCTCC TCGCTGCGCA CCCAGTGGAT GGAATTCGAC ATCTGGCTGG TGTCGCTGCT GATCATGCTG GTGCTGTTCG GCATCGGCTC GATCGGCTGG CGCAAGGTCG GCGTCGACAT GCGCCGCACC CTCGGCGTCG CCACGCTGGT GCTGATCATC GCCTATGTCC TGATGCCGCG CATCGTCATC GGCTCGGCCT ATGCCGACAT GCGGCTCGCC CCCTATGTCG TCGCGATCGG GGTGCTCGGG CTGGTGCCGC GCACCACCAA CCGGGTCGCG CTGGGCAGCA TCGCCGCGAT CGCGCTGGCG ATCTTCGGGG TGCGCGTGTG GCAGGCGACC GTCCAGTTCG CCGGCATCTC CGCCTATCAG GAGCAGCAGC TCGCCGCGCT CGACCATGTC GACCGCAACG CCCGCGTCTT CGCGCTGGTC GACCTGCCCT GCCTGTCGCG CTGGGAATCG CCCCGGCTCG AACATCTCGG CGCGATGGCG ATCGTCCGGC GGGAAGCGTT CGTCAACGGC CAATGGACGA TGGCGGGCGC GCAGCTGCTG TCGATCACCT ACGCCCCCGC CAAGGGCTAT GCCGAGGACC CGACCCAGGT GATGCGCCCG CGCCGCTGCC GCGCGCCGCG ATCGCGCAGC ATCGAAAGCT CGATCGCGCT CTTCCCGCGC GAGGCGTTCG ACTATCTGTG GCTGATCAAC GCCCCGCGCG ATCGCTGGCC GATCAACGAT CCGTCGCTCA AGCTGATCTG GAACGGCGGC GAGCGCGGCG CGCTCTACAG CATCCAGGAA GACGTCGCGC CCTTCCGCTT CAAGCCGGTG CGCTGA
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Protein sequence | MFRSTPPLTP PSGWWTRPWY IAVLAIISII PLIRPEVPPL VDLMGHMGRY RVELSDPSSP LLTDYFSFQW ALMGNLGVDL LIVPMAKLFG LELGVKLIVM MVPPLTLTGF LLIAREVHGR LPATAGLVAP FAYCWPFQWG FINYVLAMAF ALNAFALWLY LARMGRIRLR AILFVPIGCL VWLAHGFAWG VLGLLAFSAE IVRMRDVEGR GYAEALWRGA LHCLPLAPPM LLMLLWRSGD VQGETADWFN WKAKYVYLVS SLRTQWMEFD IWLVSLLIML VLFGIGSIGW RKVGVDMRRT LGVATLVLII AYVLMPRIVI GSAYADMRLA PYVVAIGVLG LVPRTTNRVA LGSIAAIALA IFGVRVWQAT VQFAGISAYQ EQQLAALDHV DRNARVFALV DLPCLSRWES PRLEHLGAMA IVRREAFVNG QWTMAGAQLL SITYAPAKGY AEDPTQVMRP RRCRAPRSRS IESSIALFPR EAFDYLWLIN APRDRWPIND PSLKLIWNGG ERGALYSIQE DVAPFRFKPV R
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