Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2764 |
Symbol | |
ID | 5198412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3055230 |
End bp | 3056591 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640582317 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001263257 |
Protein GI | 148555675 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCT GGCTCGACCA TCTCGCCGAC CGTAGCGGTC CCAAATATCT CGCCATCGCC GACGCGATCG ACCATGCGGT GCGGACCGGC GCGCTGCGCC CCGGCGAGCG GTTGCCGCCG CAGCGCGAAC TGGCGGCCGA ACTGGGCGTC GACCTGACCA CCGTGACCCG CGCCTATGGC CTCGCCCGCG ACGCCGGGCT GATCGAGGGC GCGGGGCGGC TCGGCTCCTA TGTCCGCAAC GCCGCCGGGC TGCCGCTCGC CGACCTGACC GCCGATTCGG GGATGATCAT GCCGCCCCAG CCGGGCTTCG CGCTGCTCGG CCAGGCGATG CGCGACGGCA TGGCGAAGCT GCTCCGCGCC GGGGGGCAGT CGCCGCTGCT CCAGTACCAG CCGAGCGGCG GCGCGCTGCG CGACCGGCAG GAGGCGGCGC AGGCGCTCGC CGCGCGCGGC ATGGCGACCG CCGAGGACCA GGCGATCGTC ACCGCGGGCG GGCAGAACGC GCTCCACGCG ATCATCGGCA CGATGTTCGC GCCCGGCGAT GTGATCTGCG CCGGTCGATC GACCTATCCG GGGTTGCTCG CGCTCGCCCG CCGCTTCGGC CTGACGGTGC GCGCGATCCC CGGCGACGGC GAGGGGCTCG ATCCCGACGC GGTCCAGGCG GCGGCGCTGG CGGGCGCCAA GGCGGTCTAT GTCGTGCCGA CCAACGACAA TCCGACCACC GCGACGCTCG ACCTCGAACG GCGGCTGTGG CTGGCGGCGA TCATCCGCCG CCACGGCCTG ACCCTGGTCG AGGACGACGC CTATGGCCAG CTTCCCGCCC GGCCGCTGCC GCCGCTCGCC GCCTTCGCGC CGGAACGGAG CTGGCATGTC GCGAGCGTCG CCAAGATCGT CTCGCCGGTG CTCCGCGTCG CGCATGTCCG GGCGCCCTCG GCGGCGGCGG CGCGGCGGCT GGTCGGCGAC ATCAGCGAGA CCTCGGTGAT GGCGCCGCCG CTCAACGCCG CGCTCGTCAC CCATTGGCTG CGCGAAGGGG TGTTCGCCGA TCTCGTCGCG CGGGTCCGCG CCGAGGGGGT GGTGCGCCAG CGGCTGGTGG CGCCGCTGCT CGCCGGGCTC GACCATGCCG CCCATCCCGA GGGCTATCAT ATCTGGCTGC GGCTGGCCGA GACCGCCCCC GCGCCCGCCG AGCTGGCGTC GCGGCTGAGC CCGCTGGGCC TGTCGATCGT CCCCGGCGAG CGCTTCGCGG TCGATCCGGC GGCGGCCGAG CGCGCGGTGC GCATCTCGAT CGGCGGGGCG ATCGGCCATG AACGCCTGGC GCGGGCATTC GAGGGATTGC GCGCGCTGGT CGGCGCGGCG CCGGCCCGCT AG
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Protein sequence | MQSWLDHLAD RSGPKYLAIA DAIDHAVRTG ALRPGERLPP QRELAAELGV DLTTVTRAYG LARDAGLIEG AGRLGSYVRN AAGLPLADLT ADSGMIMPPQ PGFALLGQAM RDGMAKLLRA GGQSPLLQYQ PSGGALRDRQ EAAQALAARG MATAEDQAIV TAGGQNALHA IIGTMFAPGD VICAGRSTYP GLLALARRFG LTVRAIPGDG EGLDPDAVQA AALAGAKAVY VVPTNDNPTT ATLDLERRLW LAAIIRRHGL TLVEDDAYGQ LPARPLPPLA AFAPERSWHV ASVAKIVSPV LRVAHVRAPS AAAARRLVGD ISETSVMAPP LNAALVTHWL REGVFADLVA RVRAEGVVRQ RLVAPLLAGL DHAAHPEGYH IWLRLAETAP APAELASRLS PLGLSIVPGE RFAVDPAAAE RAVRISIGGA IGHERLARAF EGLRALVGAA PAR
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