Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2744 |
Symbol | |
ID | 5196992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3029564 |
End bp | 3030511 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640582297 |
Product | hypothetical protein |
Protein accession | YP_001263237 |
Protein GI | 148555655 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0811657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC GGTCGAACCA TGTGCTGGTG GGCGGCGTCG TCCTCGCCCT GCTGGTCGCG CTGCTCGTCT TCATCGTCTG GCTGGCGGGG TTCAACACCG CGAGCAACCA GCGCTACGAC ATCTTCTTCA AGACCTCGGT CGACGGGCTC GCCAAGGGAT CGCCGGTCAA TTTCTCGGGC GTGCCGGTCG GCAAGATCGA GGAGATCAAG CTGCTGCCCG ACAGCCCGGA GTTCGTCCGC GTCCGCATCG CGATCGACCA GGACACGCCG ATCCTGCAGG GCACCACCGC GACGATCGCC GGCATCGGCT TCACCGGGGT CAGCCAGATC AACCTCGACG GCGCGGTCAA GGGCGCGCCG CCGATCACCG AGCCGGGGCC CTATGGCGAG CCGGTGATCC CGACCAAGCC GGGCGCGCTG GGCGAACTGC TCAACTCGGC GCCCGAGCTG CTCAACCGCA TCTCGACCCT GACCGAGCGG CTGACCGAGC TGCTCAACGA CAAGAACCAG AAGTCGATCA GCGGCATCCT CGCCCATGTC GACAAGCTGT CGGGCGACCT CGCCGATCGC GGGCCCGAGA TCGCCGCCGC GGTCGTCCAG CTCAAGACGA CGATGGAGCA GGCGGGCAAC GCCGCCGAGC GGGTCGGCCA GCTCGCCGAG ACGACCAACG GGGTGATGGC CGACGACGTC AAGCCGGCGA TGGCGAACCT CAACAAGGCC ACCGTCGCCG CCCAGCACAC GCTGGAGACG CTCGACGCGA CGATCACCGA CGCGCGGCCC GGCATCAAGG CCTTCTCGAC CCAGACGGTG CCGCAGATCA ACCAGCTCGC GCGCAACCTG GCCGAGATGT CGGAGGCGCT CGGCGCCATC TCGAACAAGC TCGACCGGGG CGGGGCGGGC GCCGTGCTCG GCGGCTCCAA GCTGCCCGAC TACAAGCCAA GGAACTGA
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Protein sequence | METRSNHVLV GGVVLALLVA LLVFIVWLAG FNTASNQRYD IFFKTSVDGL AKGSPVNFSG VPVGKIEEIK LLPDSPEFVR VRIAIDQDTP ILQGTTATIA GIGFTGVSQI NLDGAVKGAP PITEPGPYGE PVIPTKPGAL GELLNSAPEL LNRISTLTER LTELLNDKNQ KSISGILAHV DKLSGDLADR GPEIAAAVVQ LKTTMEQAGN AAERVGQLAE TTNGVMADDV KPAMANLNKA TVAAQHTLET LDATITDARP GIKAFSTQTV PQINQLARNL AEMSEALGAI SNKLDRGGAG AVLGGSKLPD YKPRN
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