| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2711 |
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| Symbol | |
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| ID | 5198871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2993908 |
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| End bp | 2994600 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582265 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001263205 |
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| Protein GI | 148555623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TCGCCTCGGG GCCCAATCGC CTCGCCATCT TCGACTGCGA CGGCACGCTG
GTCGACAGCC AGGCCAATAT CTGCCGCGCC ATGGCCGAGG CGTTCGCGAT CGAGAAGCTG
CCGGAGCCGG CCGCCCCGGC GGTCCGTCGC GTCGTCGGCC TCAACCTGAC CCAGGCGGTC
GCGGTGCTGC TGCCCGACGC CGACCATGAC CTGCACGTCC GGGTCGGCGA GACCTACAAG
CGCGCCTTCC AGGCGATGCG CGGCGCGGGC GAGGTCGACG AGCCGCTGTT CCCCGGCGTC
GCCGAGACGC TGCGCGCGCT GGACGCGGAC GGCTGGCTGC TCGCGGTGGC GACCGGCAAG
TCCGACCGCG GGCTCCACCA TTGCCTGGAG GCGCACGGCA TCCACGACCT GTTCGTCTCG
CTCCAGACCG CCGACCGCCA CCCGTCCAAG CCGCATCCGT CGATGATCGT CCAGGCGATG
GCCGACGCCG GCGCGATCCC GGCGACCAGC GTGATGATCG GCGACACGAG CTTCGACATC
GGCATGGGGG TCAATGCCGG CTGCGCGACG ATCGGCGTCG CCTGGGGCTA TCATACCCCC
CGCGAGCTGT TCGACGAGGG CGCCGATTTC GTCGCCGACC GGCCCGACCA GCTTCCCGAT
ATCCTCCGAC TCGCGCTATC GGCACGGCCA TGA
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| Protein sequence | MSALASGPNR LAIFDCDGTL VDSQANICRA MAEAFAIEKL PEPAAPAVRR VVGLNLTQAV
AVLLPDADHD LHVRVGETYK RAFQAMRGAG EVDEPLFPGV AETLRALDAD GWLLAVATGK
SDRGLHHCLE AHGIHDLFVS LQTADRHPSK PHPSMIVQAM ADAGAIPATS VMIGDTSFDI
GMGVNAGCAT IGVAWGYHTP RELFDEGADF VADRPDQLPD ILRLALSARP
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