Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2692 |
Symbol | |
ID | 5199042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2977144 |
End bp | 2978094 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582246 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001263186 |
Protein GI | 148555604 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATA CCGCTCTTCC CCCACTCGAC CTGCTGATCG CGGCGCCGCG CGGCTTCTGC GCGGGCGTCG ACCGGGCGAT CCGCATCGTC GAGCTGACGA TCGAGAAATA CGGCCCGCCG GTCTATGTCC GGCACGAGAT CGTCCACAAC AAATATGTCG TCGACGACCT GAAGGCGAAG GGCGCGATCT TCGTCGAGGA GCTCGACGAG GTGCCCGACG ACGTCCCCGT CGTCTTCTCG GCGCACGGCG TGCCGAAGGC GGTGCCCGCC AAGGCGGCCG AGCGCGGGCT CAACTATCTG GACGCGACCT GCCCGCTGGT GTCGAAGGTC CACCGCCAGG CCGAGCGGCT GGTCAAGAAC GGCCACCATA TCCTGTTCAT CGGCCATAAG GGCCATCCCG AGGTGATCGG CACCTTCGGC CAGGTGCCCG AGGGGGTGAT GACGCTGGTC GAGACCGCCG CCGACGCCGA GGCGGTGGCG GTGCCCGACG GCGCCCCGCT CGCCTTCCTC AGCCAGACCA CCCTGTCGGT CGACGACACC GTCGAGATCA TCGGCGTGCT GCGCCGCCGC TTCCCGCAGA TCGAGGCGCC GCGCAGCGAG GACATCTGCT ACGCCACCTC GAACCGCCAG GCGGCGGTCA AGGCGATCGC GCCGAAATGC GAGGCGATGC TGGTGATCGG CGCGCCCAAC AGCTCCAACT CGCTGCGCCT CGTCGAGGTG GCCGAGCGGC AGGGCGTCAA GGCGCGGCTG ATCCAGCGCG CGGCGGAGAT CGACTTCGGC TGGCTCGACG GCGTCCGCAC GCTCGGCATC ACCGCCGGCG CCTCGGCGCC CGAGATATTG GTGCGCGAGC TGGTCGACAC GCTCGCGACC CGATTCGCCG TGCGCGAATG CGAGGTCGAA TCGGTGACGG AGGACATGTT GTTCAAGCTT CCGCGGGCGC TGGTCGCCTG A
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Protein sequence | MADTALPPLD LLIAAPRGFC AGVDRAIRIV ELTIEKYGPP VYVRHEIVHN KYVVDDLKAK GAIFVEELDE VPDDVPVVFS AHGVPKAVPA KAAERGLNYL DATCPLVSKV HRQAERLVKN GHHILFIGHK GHPEVIGTFG QVPEGVMTLV ETAADAEAVA VPDGAPLAFL SQTTLSVDDT VEIIGVLRRR FPQIEAPRSE DICYATSNRQ AAVKAIAPKC EAMLVIGAPN SSNSLRLVEV AERQGVKARL IQRAAEIDFG WLDGVRTLGI TAGASAPEIL VRELVDTLAT RFAVRECEVE SVTEDMLFKL PRALVA
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