Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2689 |
Symbol | |
ID | 5200616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2973614 |
End bp | 2975488 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582243 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001263183 |
Protein GI | 148555601 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCATT GGCGTTCCGA TCGCGGCCGG AACAGCTATG TCTGGTCGCC CGAGATGTAC CGCATCCTCG GCTTCGCGCC CGACACGGCG CCGACCAGCG AGATGATCCG CGCCCATTAC CATCCCGACG ACGTCGACAA GGCCGACCTC GCGGTGGCCG AGACCTTCCG CACCGGATCG CTGCCGATGA CGCGGCTGCG CTGGATGCGG CCCGACGGGC GGACGATCCA CATCCAGATC GCCGGGCAGC TCGAAGGGCC AGAGACGATC ATCGGCATCC TGCGCGACGT GACCGAGGAG GTCGAGACCG AACGCGCGCT GATCGCCGCG CGCGACCAGG CCCGCGCCGC CGAACGGACC CGCGCCGAGA TGCTCGAGGT GGTGAGCCAC GAGATCCGGA CGCCGATGCA CGGCCTGCTC GCCGCGATCG ACGCGCTGCG CCGCGAGCCG CTCGACGGCG CGCGCCAGGC CCAGCTCGCC AGCCTGAACC AGGCGGCGAC GACGGTGATG GGCGTGATCG ACGACATGCT CGACTATAGC CGCATCGAAT CGGGCCGGGT GGTCATCGAG AGCATCAATT TCGACCTGGT GTCGGTGGTC CGCACCACCA TCGACCTGCA CAACGGCGCG GCCGGAGCCA AGGGCCTCGG GCTCGACGCG TTCGGCCTCG ACGGCGATCC CCGGCCGGTG CGCGGCGATC CGGCCCGGCT GCAGCAGCTT CTGTCGAACC TGATCAGCAA CGCGATCAAG TTCACCGAGA CGGGCAGCGT CTCGATCAGC CTGTCGCCGA CCCGGTCCGA CGGCGACACC GACTGGTGGA TGATCATCGT CCGCGACAGC GGGCGCGGCA TCGGGCAGGA GGCGCTCGGC CGCATCTTCT CGCGCGGGGA GCAGGTCGAC GCGGCGCGGA TGCGGCTCCA GGGCCGCACC GGCCTCGGCC TCGCGATCAG CCAGCAGCTC GCCGAGGCGA TGGGCGGGTC GATCGCCGCG TCGAGCGATC CGGGCAAGGG CACGACCTTC TCGGTCGAGC TGCCGTTCAA GCGCGCCGAC GCCGCGGCGG CCGAGGCGAT GGCCGGCAAG GCGACCGGGC CGATGCGCAT CCTGCTGGCC GAGGACAACC CGATCAACCG CCGGCTGATG GCGGGCCTGC TCGCGCGCGA GGGGCACGAC GTCGTCGCGG TCGAGGACGG CCGCAAGGCG CTGGGGGCGG TCGCCACCCA GCCGTTCGAC CTGGTGCTGA TGGACATGCA GATGCCCGAG CTCGACGGGA TCGAGGCGAC GCGCGCGATC CGCGCGCTCG ATCCGCCCGC GTCGGACACG CCGATCCTGG CGATCAGCGC CGATTCGATG CCCGAGCGGC GGCGCGTCTA TTTCGAGGCG GGGATCGACA GCTTCCTGCC CAAGCCGATC GTCTCGGGCC AGCTGCTCGA CATGATCGGC ACGATGCGCC GCAACCGGCC GGCCACGAGC GCGGCGGGCG ACAGCTTCGA CCGGGAGCGG CTCAACCTGC TCGTCGAGAC GGCGGGCTAT GCCGACGCCG CTGTGCTGAT GAAGATGCTG ATGTTCGACG TCAGCGACCG GCCCCGCCGC ATCGCCGCCG CGGTGCGCGC GCAGGCCTGG GACCTGGCGA TGGCCGAGAC CGAGGCGCTG CGCACCCTGC TCGACAGCTT CGGCACCTTC AGCCTGTCGC GCCTGCTCGC CGCGATCGCC CGGCAATGCG CCCGGCAGAC CTGCCCCCCG GCGGTGCTCG ACGAGCTGTT CGACCAGGCG AGCAAGCTCG GCATATTGCT CCAGCACGAG GTCGGATCGG TCCCCACCCA GATCGCCCAG GCGATCGATA ATGTGGTGGA AACCGACTTC GGCAGAAGTC GGTAG
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Protein sequence | MGHWRSDRGR NSYVWSPEMY RILGFAPDTA PTSEMIRAHY HPDDVDKADL AVAETFRTGS LPMTRLRWMR PDGRTIHIQI AGQLEGPETI IGILRDVTEE VETERALIAA RDQARAAERT RAEMLEVVSH EIRTPMHGLL AAIDALRREP LDGARQAQLA SLNQAATTVM GVIDDMLDYS RIESGRVVIE SINFDLVSVV RTTIDLHNGA AGAKGLGLDA FGLDGDPRPV RGDPARLQQL LSNLISNAIK FTETGSVSIS LSPTRSDGDT DWWMIIVRDS GRGIGQEALG RIFSRGEQVD AARMRLQGRT GLGLAISQQL AEAMGGSIAA SSDPGKGTTF SVELPFKRAD AAAAEAMAGK ATGPMRILLA EDNPINRRLM AGLLAREGHD VVAVEDGRKA LGAVATQPFD LVLMDMQMPE LDGIEATRAI RALDPPASDT PILAISADSM PERRRVYFEA GIDSFLPKPI VSGQLLDMIG TMRRNRPATS AAGDSFDRER LNLLVETAGY ADAAVLMKML MFDVSDRPRR IAAAVRAQAW DLAMAETEAL RTLLDSFGTF SLSRLLAAIA RQCARQTCPP AVLDELFDQA SKLGILLQHE VGSVPTQIAQ AIDNVVETDF GRSR
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