| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2656 |
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| Symbol | |
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| ID | 5198480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2937605 |
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| End bp | 2939080 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582210 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_001263150 |
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| Protein GI | 148555568 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA GTCTGAGCGA AAGGCTGGGC GGGGTCTTCG ACCGCCTGCG CGGCCGTGGC
GCGCTGAACG AATCGGACGT GCGCGAGGCG ATGCGCGAAG TCCGCGTCGC GCTGCTCGAG
GCCGACGTCG CCCTGCCCGT CGTCCGCCAG TTCGTCGAGA AGGTCACCGA GCAGGCCGTC
GGCCAGCAGG TGCTCCGCTC GGTCACGCCG GGGCAGCAGG TCGTCAAGAT CGTCAACGAC
GCGCTGGTCG AGATGCTCGG CTCGGAGGCG TCGGACCTCA ACCTCGACGT CACCCCGCCC
GCGATCGTGA TGATGGTCGG CCTGCAGGGC TCGGGCAAGA CGACGACCAC CGCCAAGATC
GCCAAGCGGC TCAGCGAGAA GGGCCGCAAG AAGGTGATGA TGGCGTCACT CGACGTCAAT
CGTCCGGCGG CGCAGGAACA GCTCGCCGTG CTCGGCACCC AGGCATCGGT CGCGACCCTG
CCGATCGTCG CCGGCCAGCA GCCGGTCGAC ATCGCCCGCC GCGCGCTCCA GGCCGCGAAG
CTCCAGGGCT TCGACGTGCT GATGCTCGAC ACCGCCGGCC GCCTGCACGT CGACCAGGCG
CTGATGGAGG AGATGAAGGC GGTCGCCACG GTCGCCGAGC CGGAGGAGAT CCTGCTCGTC
GTCGACGCGC TGACCGGCCA GGACGCGGTC AACGTCGCCA AGAGCTTCTC CGAACAGGTC
GCGCTGACCG GCGTGGTGCT GACCCGGATG GACGGCGACG CGCGCGGCGG CGCCGCGCTG
TCGATGCGCG CCGTCACCGG CAAGCCGATC AAGTTCGTCG GCACCGGCGA GAAGCTGGAC
GGGATCGAAC TGTTCCAGCC GGCCCGCGTC GCCGGCCGCA TCCTCGGCAT GGGCGACGTC
GTCAGCCTGG TCGAGAAGGC CGCCGAGACG ATCAAGGTCG AGGAGGCCGA GGCGCTCGCC
GCGCGGATGG CCAAGGGCCT GTTCGACCTC AACGACCTGC GCAACCAGCT GCGCCAGATG
TCGCGGATGG GCGGGCTGTC GGGCCTGGCG GCGATGCTGC CCGGCATCAA GCAGGTCAAG
CAGGCGATGG CCTCCGGCGC CGCCGACGAC AAGGTGCTGG TGCGGATGGA CGCGATCATC
GGATCGATGA CGCCCAAGGA GCGCGCCAAG CCCGAACTGC TCAACGCCAA GCGCAAGATC
CGCGTGGCCA AGGGCTCCGG CACCACGGTG CAGGACGTCA ACAAGCTCCT GAAGATGCAT
CAGGACATGT CGACGGTGAT GAAGAAGATG AAGAAGATGG GCGGGCTGAA GGGCCTTGCC
GGCCTGCTCG GCGGCGGTGG GGGCGGTGGC CTCGGCGGCC TGCTCGGCGG TGGCGGCGCC
CCGCCGGCGG GCGGCGGGCT TCCGGGGCTT CCCGGCCTGC CGGGCAATCC GCAGGGCCTG
CCCCCCGGCT TCCAGAATTT CCTGAAGAAA CGCTGA
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| Protein sequence | MFESLSERLG GVFDRLRGRG ALNESDVREA MREVRVALLE ADVALPVVRQ FVEKVTEQAV
GQQVLRSVTP GQQVVKIVND ALVEMLGSEA SDLNLDVTPP AIVMMVGLQG SGKTTTTAKI
AKRLSEKGRK KVMMASLDVN RPAAQEQLAV LGTQASVATL PIVAGQQPVD IARRALQAAK
LQGFDVLMLD TAGRLHVDQA LMEEMKAVAT VAEPEEILLV VDALTGQDAV NVAKSFSEQV
ALTGVVLTRM DGDARGGAAL SMRAVTGKPI KFVGTGEKLD GIELFQPARV AGRILGMGDV
VSLVEKAAET IKVEEAEALA ARMAKGLFDL NDLRNQLRQM SRMGGLSGLA AMLPGIKQVK
QAMASGAADD KVLVRMDAII GSMTPKERAK PELLNAKRKI RVAKGSGTTV QDVNKLLKMH
QDMSTVMKKM KKMGGLKGLA GLLGGGGGGG LGGLLGGGGA PPAGGGLPGL PGLPGNPQGL
PPGFQNFLKK R
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