Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2640 |
Symbol | |
ID | 5198862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2922300 |
End bp | 2922989 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640582196 |
Product | sugar transferase |
Protein accession | YP_001263136 |
Protein GI | 148555554 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.961437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAGC GGTTACTCGA TATGATAGTG AGCGCGAGTG CTCTGCTGCT GCTGTCGCCC ATTCTATTGA TCATCTGCCT GATCCTGCGC TTCAGCGGCG AAGGCGAGGT CTTTTTCGGG CAGGAACGAA TCGGCTACAA AGGCAAGCCC TTCCGCATCA CCAAGTTCGC CACGATGGTG AAGAGCGCCG CAGTGATCGC CCAGGGGGAT TACACGGTTC AGAACGACCC ACGAGTATTG CCGGTCGGCC GCTTCCTGCG AAAGTCCAAA ATCAACGAGT TGATGCAGCT GTGGGATGTT CTGCGGGGCG AGATGAGCTT GGTCGGACCG CGCCCGCAGA TTCCGACGAC GCAAGCCTAT TATCCTCCCT TCTACCAGGA CGTGCTGGTC CACGTGCGCC CGGGGATCAC CGGGGTGGGG TCGTTGGCCT TCCGCGACGA GGAAGCCATC CTGACGCGCG CCGTCGACCG CGACTATTGC TACACGCGAC AGATCATCCC CTACAAAGCC GAGCTCGAGA ACTGGTATGC AGCCAACCGC TCGCTGCTCA TAGATGTCGC GCTCATCGGC TTAACCGCCT GGTATGTCGT CTCACCACGG TCGACGGCGC TTTTGAGGCT ACTTCCGGGG TCATTGCACC GTGATATAAG CTCGTTCGAC GGCATCGAAC CACAGGAGAG GCAAGAATGA
|
Protein sequence | MLKRLLDMIV SASALLLLSP ILLIICLILR FSGEGEVFFG QERIGYKGKP FRITKFATMV KSAAVIAQGD YTVQNDPRVL PVGRFLRKSK INELMQLWDV LRGEMSLVGP RPQIPTTQAY YPPFYQDVLV HVRPGITGVG SLAFRDEEAI LTRAVDRDYC YTRQIIPYKA ELENWYAANR SLLIDVALIG LTAWYVVSPR STALLRLLPG SLHRDISSFD GIEPQERQE
|
| |