Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2602 |
Symbol | |
ID | 5200230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2884395 |
End bp | 2885402 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640582158 |
Product | glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | YP_001263098 |
Protein GI | 148555516 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.745414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGA AGGTTGCGAT CAACGGTTTC GGACGCATCG GGCGCAACGT CGCCCGCGCC ATCCTCGAGC GCCCGGACTG CGGCCTTGAG CTGGTCTCGA TCAACGACCT CGCCGACGCC AAGGCCAATG CCCGGCTGTT CAAGCGCGAC AGCGTCCACG GCGCCTATCC GGGCAGCGTC GAGGTCGACG GCAACGACCT GATCATCGAC GGCAAGCGCA TCGCCGTCAC CGCCGAGCGC GACCCGGCCA AGCTGCCGCA CGCCGCGCAG GGCATCGACA TCGCGCTCGA ATGCACCGGC TTCTTCGCCA ACCGCGACGG CGGCCAGAAG CATCTCGACG CCGGCGCCAA GCGCGTCCTG ATCTCGGCCC CGGCCAAGGG CGTCGACCTG ACCGTCGTCT ATGGCGTCAA CCATGACGCG CTGACCGCCG ACCACAAGAT CGTGTCGAAC GCGTCGTGCA CCACCAACTG CCTGGCGCCC TTCGCCAAGG TCCTGCACGA GGCGATCGGC ATCGAGCGCG GCCTGATGAC GACGATCCAC GCCTATACCA ACGACCAGCG GATCCTCGAC CAGATCCACA GCGATCCGCG CCGCGCCCGC GCCGCCGCGA TGTCGATGAT CCCGACCACC ACCGGCGCCG CGGTCGCGGT CGGCGAGGTG CTGCCGGCGC TCAAGGGCAA GCTCGACGGT TCGTCGATCC GCGTGCCGAC CCCGAACGTC TCGGTCGTCG ACCTGACCTT CACCCCGTCG CGCGAGACCA CCAAGGAAGA GGTCAACGCG CTGCTCAAGG CCGCGTCGGA AGGCCCGCTG AAGGGCGTGC TCGGCTATAC CGACGAGCCG CTGGTCTCGA TCGACTTCAA CCATGACGCG CATTCGTCGA CCATCGACAG CCTCGAGACC GCCGTGCTCG AAGGCAAGCT GGTCCGCGTG CTGAGCTGGT ACGACAATGA ATGGGGCTTC TCGAACCGGA TGGTCGACAC CGCCGGGGCG ATGGGCAAGC TCATCTGA
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Protein sequence | MAVKVAINGF GRIGRNVARA ILERPDCGLE LVSINDLADA KANARLFKRD SVHGAYPGSV EVDGNDLIID GKRIAVTAER DPAKLPHAAQ GIDIALECTG FFANRDGGQK HLDAGAKRVL ISAPAKGVDL TVVYGVNHDA LTADHKIVSN ASCTTNCLAP FAKVLHEAIG IERGLMTTIH AYTNDQRILD QIHSDPRRAR AAAMSMIPTT TGAAVAVGEV LPALKGKLDG SSIRVPTPNV SVVDLTFTPS RETTKEEVNA LLKAASEGPL KGVLGYTDEP LVSIDFNHDA HSSTIDSLET AVLEGKLVRV LSWYDNEWGF SNRMVDTAGA MGKLI
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