Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2562 |
Symbol | |
ID | 5200819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2843831 |
End bp | 2844370 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640582118 |
Product | transcription antitermination protein nusG |
Protein accession | YP_001263058 |
Protein GI | 148555476 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0500837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCT GGTACATCAT TCACGCCTAT TCGGGCTTCG AGAACAAGGT CCGGGAAGCG ATCCTGGCCG ATGCCGCGCG CCTGGGCCTG GAGCAGCTCG TCGAGGCCGT CGAGGTCCCC ACCGAGAAGG TCACCGAAGT CCGGCGCGGC AAGAAGATCA CGTCGGACCG CAAATTCTTC CCCGGCTATG TGCTGGCGAA GCTCAGCATG AACGACGACG TCTACCACCT GGTGAAGAAC ACGCCGAAGG TGACGGGCTT CCTCGGTTCG TCGGGCAAGC CGCAGCCGAT CAGCGAGGCC GAGGCCGCGC GCATCCTCAA CACCAAGGAG GAGGCCGCCG CCGCCGCGCC CAAGACCAAG CTCAAGGTCG ATTACGAGAT CGGCGACCAG GTCAAGGTGC TCGACGGTCC GTTCGCCAGC TTCAACGGCG TCGTCGAGGA GCTCGACTTC GACCGCAGCC GCGTCAAGGT GTCGGTGTCG ATCTTCGGCC GCGCGACCCC GGTCGAGCTC GAGTTCGAGC AGGTCGAGCG AGTCAAGTGA
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Protein sequence | MARWYIIHAY SGFENKVREA ILADAARLGL EQLVEAVEVP TEKVTEVRRG KKITSDRKFF PGYVLAKLSM NDDVYHLVKN TPKVTGFLGS SGKPQPISEA EAARILNTKE EAAAAAPKTK LKVDYEIGDQ VKVLDGPFAS FNGVVEELDF DRSRVKVSVS IFGRATPVEL EFEQVERVK
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