Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2278 |
Symbol | |
ID | 5196485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2534029 |
End bp | 2535150 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581824 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001262775 |
Protein GI | 148555193 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.144858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAT TAGCCCTATT GACCGCGCTT GCCGCGACGG CGCTCGCGGG GCCCGCGTTC GCGCGCGACA ACAGTTGGTA TGTCGGTATC GAAGGCGGCC TGATGCAGCC GCAGGATACC AAGTTCAACG TCGGCCCGTC GCCTTTGTCG CCGGGCGGCC GGACGACGAT CGACAACAAG CTCGGTTATG ACGTCGATGC CATCCTCGGC TACGACTTCG GCATGTTCAG GCTGGAGGAG GAAATCTCCT ACAAGCGTGA TCGCGTGAAG GGCATCACCA CCGGCCCGTC GCGCACCCCC GCCGGACCGG GCGGCTTCGG CGCGCCTCCG GGCGTCTATC CGGACGCCTC GGGCAAGAAC ATCTCCTTCG GCGTGATGCT CAACGGCCTG CTCGACTTCG GCAACGAGGA CGGCCTGTCG GCCTATGTCG GCGGCGGCGC CGGCATCGCC GCGCTCAAGC TCCACAATTA CAATGTCTCC GGCGGGGACT TCCTCGACTA TGACCTGTCC AAGCGCTTCG CCTGGCAGGC GATCGCCGGC GTCCGCTACG CGGTCAGCAG CCATGTCGAT GTCGGTCTGA AATATCGCTA CTTCAACGTC ACCAAGGTGC GCCCGGTCGA CGTCGTCGGC GCGCAGTACA GCGGCAAGTG GCGCTCGCAC AGCGCGCTGC TCAGCCTGAT CTACAACATC GGGTCGCCGG CCGCTCCGCC GCCGCCTCCC CCGCCGCCCC CGCCTCCTCC TCCGCCCCCG CCTCCTCCGC CGCCGCCTCC GCCGGTGGTC GAGACCCCGG GTCCGTTCAT CGTGTTCTTC GACTGGGACA AGTCGGACAT CACGGCGGAA GCCGCGTCGA TCCTCGACAA TGCGGCCAAT GCCTATGCGA CGACCGGCCA GGCGCGGGTC CAGCTTGCCG GCCACGCCGA CAAGTCGGGC AGCGACCAGT ATAATGTCGG CCTGTCGCAG CGCCGCGCCG ACTCGGTGAA GGCCTACCTC GCCGGCAAGG GCGTGCCCGA CTCGGCGATC ACGACCGAGG CGTTCGGCGA AAGCCGCCCA CTGGTCGAGA CCGCCGACGG CGTCCGCGAG CCGCAGAACC GCCGCGTCGA GATCACCTAC GGCGGCATGT AA
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Protein sequence | MRRLALLTAL AATALAGPAF ARDNSWYVGI EGGLMQPQDT KFNVGPSPLS PGGRTTIDNK LGYDVDAILG YDFGMFRLEE EISYKRDRVK GITTGPSRTP AGPGGFGAPP GVYPDASGKN ISFGVMLNGL LDFGNEDGLS AYVGGGAGIA ALKLHNYNVS GGDFLDYDLS KRFAWQAIAG VRYAVSSHVD VGLKYRYFNV TKVRPVDVVG AQYSGKWRSH SALLSLIYNI GSPAAPPPPP PPPPPPPPPP PPPPPPPPVV ETPGPFIVFF DWDKSDITAE AASILDNAAN AYATTGQARV QLAGHADKSG SDQYNVGLSQ RRADSVKAYL AGKGVPDSAI TTEAFGESRP LVETADGVRE PQNRRVEITY GGM
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