| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2258 |
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| Symbol | |
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| ID | 5199842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2512669 |
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| End bp | 2513595 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581804 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262755 |
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| Protein GI | 148555173 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.629032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA ATTCCACCCA GTCCGCGCCC GGCGGCCATG TCCGCCCGGA CCCGAACGAC
CCGACCCGGC CGAAGCGCGG CCTGACGCCC GACGACCTGG CGACGCATGA CACGGTGTTC
CGGCCCGACC TGCTGGCCGG CCATCGCATC CTGATCACCG GCGGCGGCAG CGGCATGGGC
AAGGCGGCGG CGTTCCTCGC CGCGCGGCTG GGCGCCGAGG TCGCGATCTG CGGCCGCAAC
GCCGACAAGC TGGCCGTCAC CCGCGACCAG ATCCGCGCCG CGACCGGCCG CGAGGTGATG
ACCGCCGCGA TGACGATCCG CGATCCCGAG GCGTGCGAGG CGCTGATCGC AGGGATCCAC
GATCGGATGG GCGGGCTCGA CACCGTCGTC AACAATGCGG GGGGACAATT CCCGCAGGAC
GCGATCGACT TCAGCCGCAA GGGCTGGCTG GCGGTGATCG ACACCAATCT CAACGGCACC
TGGTGGATGA TGCAGGAGGC GGCGAAGCGC TGGCGCGAAA CCGGCGCGCC GGGCCACATC
ATCAACATCG TCGCCAATGT CGAGCGCGGC ATGCCGCAGG CGGCGCACAC CTGCGCGGCG
CGCGCGGGGG TGATCTATCT GTCGAAGACG GTCGCCACCG AATGGGCGCC GTTCGACATA
AGGATCAACT GCATCGGCCC CGGCGTGATC GAGACCGAGG GCTTCGGCGT CTATCCGGAG
GAGGCGCTGG TCCGCTTCCA CAAGGCCAAT CCGATGAAGA CGCGCGGCAA TGCGTGGGAC
GTGGCCGAGG CGATCGCCTA TCTCGCTTCC CCCGCCGGCC GCTTCGTCAA CGGCGACCTG
CTGGTGATCG ACGGCGGGCA GGCGCAGTGG GGCGTCGTCT GGCCGGGCGG CATGCCGGAC
TATTTCGACG AGAGCGGCGC GGCCTGA
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| Protein sequence | MDANSTQSAP GGHVRPDPND PTRPKRGLTP DDLATHDTVF RPDLLAGHRI LITGGGSGMG
KAAAFLAARL GAEVAICGRN ADKLAVTRDQ IRAATGREVM TAAMTIRDPE ACEALIAGIH
DRMGGLDTVV NNAGGQFPQD AIDFSRKGWL AVIDTNLNGT WWMMQEAAKR WRETGAPGHI
INIVANVERG MPQAAHTCAA RAGVIYLSKT VATEWAPFDI RINCIGPGVI ETEGFGVYPE
EALVRFHKAN PMKTRGNAWD VAEAIAYLAS PAGRFVNGDL LVIDGGQAQW GVVWPGGMPD
YFDESGAA
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