| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2198 |
|---|
| Symbol | |
|---|
| ID | 5199877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2460788 |
|---|
| End bp | 2461243 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640581743 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001262695 |
|---|
| Protein GI | 148555113 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00537344 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTA GCGTCAACAA GGTTATCATC GTCGGTCACC TCGGCCGCGA TCCGGAAAGC
CGATCCTTCC AGAATGGCGG CAAGGTCGTA GGCCTGCGCG TCGCCACCTC CGAACAATGG
AAGGACCGGT CGACCGGCGA GCGGCGCGAC CGCACCGAAT GGCATCAGGT CGCGATCCAT
AATGAGGGGT TGGCGACCAT CGCCGAGAGT TATTTGCGCA AGGGGAGCAA GGTCTATCTC
GAAGGCCAGC TCCGCACCCG CAAATGGACC GACCAGCAGG GCGTCGAGCG CTACACCACC
GAGATCGTGT TGCAAGGCTA TCAGGCTCAG CTCGTGCTCC TCGATGGCGC CCAGGGCGAT
CATCGCGACG ATCGCGGCGG CGATGGCGGC CAGCAGCAGA AATCGCGCGA AACGGACGCG
TTTGGCGGCG ATCTCGACGA CGACGTACCG TTCTGA
|
|---|
| Protein sequence | MAGSVNKVII VGHLGRDPES RSFQNGGKVV GLRVATSEQW KDRSTGERRD RTEWHQVAIH
NEGLATIAES YLRKGSKVYL EGQLRTRKWT DQQGVERYTT EIVLQGYQAQ LVLLDGAQGD
HRDDRGGDGG QQQKSRETDA FGGDLDDDVP F
|
|---|
| |