Gene Swit_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2166 
Symbol 
ID5196273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2427280 
End bp2428092 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID640581711 
Producthypothetical protein 
Protein accessionYP_001262663 
Protein GI148555081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0132201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.509385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGG GCTTTCGTGG CGTGGGCACG CGGATCGGTC TGGTCCTGCT GGGGCTGGCC 
GCCGGCATGC TCGCGACGGC TCCCGCGGGC GCGACGATCG ATCCGATGCA CCAGTTCATC
GTCAACGGCG ACTTCGAACA GACGACCAAC GGCCTCGGCC AGCTTCGCCG CAACACCAAC
GTCGTGGGCT GGACGTCCCA GCGCGATGCG GACCATAATT ACGGCTACAC CTATGTCCTC
AACAGTTCGA CCGCGTCGAG CAGCGGATCG CCGGGCGAAT CCACGCTGAA GCTGTGGGGT
CCGGGCAAGG GCGTGAACAA TGGCCTTTCC GCCAGCCCGA CCGGCGGCAA TTTCATCGGG
GCCGATGGCG CCTATCATGT CGGCAAGCTT ACCCAGACGA TCACCGGGCT GATCGTCGGC
CAGAGCTATC AGCTGAGCTT CAATTATGCC GGCGCCCAGG AATATGGCTA TAATGGTCCA
TCGACCGATG GCTGGCAATT CGGCTTCCTC GGCCAGGACA TCGATGAGCA GACCGCGATC
CTCAACAACG TCAACCACGG CTTCACCGGC TGGCAGACGC AGACCTTCAA TTTCGTCGCG
ACGCAGGCCA GCGACACGCT GTACTTCCTT GCGATGGGAA CGCCCGCGGG CCAGCCGCCC
TTCTCGCTGC TGGACAGCGT CTCGCTGACG GGCCCCTATG TGACCGCGGC GCCCGACGTC
GCGACCTGGA TGACGCTGGT CCTGGGTTTC GGCCTGATCG GATCGAGCCT GCGCAGGCTG
GGCCGTCGCT CGCAGGCGAT GCAATTCGCC TGA
 
Protein sequence
MAKGFRGVGT RIGLVLLGLA AGMLATAPAG ATIDPMHQFI VNGDFEQTTN GLGQLRRNTN 
VVGWTSQRDA DHNYGYTYVL NSSTASSSGS PGESTLKLWG PGKGVNNGLS ASPTGGNFIG
ADGAYHVGKL TQTITGLIVG QSYQLSFNYA GAQEYGYNGP STDGWQFGFL GQDIDEQTAI
LNNVNHGFTG WQTQTFNFVA TQASDTLYFL AMGTPAGQPP FSLLDSVSLT GPYVTAAPDV
ATWMTLVLGF GLIGSSLRRL GRRSQAMQFA