| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2151 |
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| Symbol | |
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| ID | 5199624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2411434 |
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| End bp | 2412849 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581696 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001262648 |
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| Protein GI | 148555066 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.563694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CCGACAAGCA GCCCCAGCAG GATCTGGACG AATTCCTCGG CGTCGAGCCG
ACCTCGCCGC GCGCGGTGCT GTTCCGCCGG ATCGGCATCG GCCTCGCCAT CGTCGTGGTG
CTGATCATCC TGTGGCGGCT GATCCTCGGC GGCGACGACA AGGCCGCCTA TGCGACCCGC
CCGGTCGAGC GCGGCGACCT GACCGTCATC GTCTCGGCGA CCGGCAACCT CGCGCCGACC
AACCAGGTCG AGGTGGGCTC CGAGCAGTCG GGCATCATCG TCGAGGTCTA TGTCGACAAC
AACGACCGGG TGAAGAAGGG CCAGCTCCTC GCCAAGCTCG ATACGTCGCG GTTGCAGGAC
GCGGTCAACC AGGCCGATGC CGGTCTGGCC TCGGCGCGCG CCGGCGTCCA GCAGGCCGAG
GCGACCGAAC AGCAGGCGCG GGCGACGCTG CGACGACAGG AACAGGTCTG GCGACTATCG
GGCGGCAAGG TGCCGTCGGC GACCGAGCTC GACGTCGCGC GGGGCGATGC GGCCCGCGCG
ACGGCGGGCG TTTCGACGGC GAAGGCCGCG GTCGACCAGG CGCAGGCCAC CCTGTCCTCG
GCGCAGACCG CACTGTCCAA GGCGTTCATC CGCTCGCCGG TCAACGGCCA GGTGCTGTCG
CGCTCGATCG AGCCGGGGCA GACCGTCGCC GCCTCGTTCA ACGCGCCGGT GCTGTTCACC
ATCGCCGAGG ACCTCCGCCA GATGCGGCTC GAGGTGAAGG TGGACGAGGC CGATGTCGGG
CAGGTCCAGA AGGGCCAGAA GGCGACCTTC ACCGTCGACG CCTTTCCCGG CCGCACCTTC
CCCGCGACGA TCGAGCGGGT CGACGTCGGC GCCAACGCGA CCGGCACCGG TTCGTCGAGC
TCGTCGTCGA GCAGCACCGC CAGCACCACG ACGAGCGGGG TCGTCGCCTA TACGGCGCGG
CTGACCGTGG CCAATGGCGA CGGGCTGCTC CGTCCGGGCA TGACCGCGAC CGCCGACATC
ATCACCACCC AGAAGAAGGA CGTGCTGCTC GTCCCGTCGG CGGCGCTGCG CTTCACCCCC
GACCGGCAGG CGGCGGGCAG CGACGGCGGC GGGATCACCA GCGTGCTCGC CCCCCGGGTC
CGCCGCCGCG GCGGATCGAG CGAGCGCGAG GCGGCGATCG GCCGCGGCAG CAAGCAGACC
GTCTATGTCG TCGCCGATTC GGGCAGCCAG CCCCAGCCGG TCGAGATCAC CGTCGGCGAG
AGCAACGGCA GCCAGGCCGA GGTGACCGGC GGCAAGCTGA GCGAAGGTAT GCAGGTCGTG
ATCGGCCAAT ATGCTGCGGG CGGCAGCGGC GGCTCCGGGC GCGGCCAGGG GACAGGCGGC
CAGGGCGGAA GCGGGCAGCG GCGCAATGGC CAGTGA
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| Protein sequence | MTDPDKQPQQ DLDEFLGVEP TSPRAVLFRR IGIGLAIVVV LIILWRLILG GDDKAAYATR
PVERGDLTVI VSATGNLAPT NQVEVGSEQS GIIVEVYVDN NDRVKKGQLL AKLDTSRLQD
AVNQADAGLA SARAGVQQAE ATEQQARATL RRQEQVWRLS GGKVPSATEL DVARGDAARA
TAGVSTAKAA VDQAQATLSS AQTALSKAFI RSPVNGQVLS RSIEPGQTVA ASFNAPVLFT
IAEDLRQMRL EVKVDEADVG QVQKGQKATF TVDAFPGRTF PATIERVDVG ANATGTGSSS
SSSSSTASTT TSGVVAYTAR LTVANGDGLL RPGMTATADI ITTQKKDVLL VPSAALRFTP
DRQAAGSDGG GITSVLAPRV RRRGGSSERE AAIGRGSKQT VYVVADSGSQ PQPVEITVGE
SNGSQAEVTG GKLSEGMQVV IGQYAAGGSG GSGRGQGTGG QGGSGQRRNG Q
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