Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2136 |
Symbol | |
ID | 5196672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2396017 |
End bp | 2396715 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581681 |
Product | Tol-Pal system, TolQ |
Protein accession | YP_001262633 |
Protein GI | 148555051 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGG ATCTGGCGGT CTCCGCATCG ACATCGGCGC TGTCGCCGAT CGCGCTGTTC CTGCAGGCGG ACATCGTCGT GAAGGCGGTG ATGATCGGCC TGCTGCTGGC CAGCGTCTGG ACCTGGACGA TCATCGTCTC GGGCAGCATG GCGCTCACCC GCGCCTTTCG GGCGAGCAAG GGTTTCGAGA CCGATTTCTG GAAGTCCGAG GACATCGACA AATTCTACGA GGGCCCCGGC CGGCAGGACA TTCCCGCCGC CAAGGTGTTC TCGGCCGGCG TCGCCGAATG GCGCCGCTCG GTGCGCAACG GCCAGCCGGT CGATCGCGAC GGCACCCGCG CGCGCCTCTC CAACGCGATG GCGGCGGCGG CGGGGGCGGA GATCGATCGC CTGTCCGACC GGCTCAACAT CCTCGCCACG GTCGGCTCGG TCGCGCCCTT CGTCGGCCTG TTCGGCACGG TGTGGGGCAT CATGCGCAGC TTCACCGACA TCGCCGCGTC GCAGAACACC TCGCTCGGCG TCGTCGCCCC CGGCATCGCC GAGGCGCTGT TCGCCACTGC GCTCGGCCTG TTCGCCGCGA TCCCGGCGGT GATCGCCTAT AACCGGCTGC TCCACCGCGT CTCGAAGATC GAAGGGCAGC TCCACCGCTT CGGCGACGCG ATCCACATGA CGCTCAGCCG CGAGCTGGAG CGCGCCTGA
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Protein sequence | MMQDLAVSAS TSALSPIALF LQADIVVKAV MIGLLLASVW TWTIIVSGSM ALTRAFRASK GFETDFWKSE DIDKFYEGPG RQDIPAAKVF SAGVAEWRRS VRNGQPVDRD GTRARLSNAM AAAAGAEIDR LSDRLNILAT VGSVAPFVGL FGTVWGIMRS FTDIAASQNT SLGVVAPGIA EALFATALGL FAAIPAVIAY NRLLHRVSKI EGQLHRFGDA IHMTLSRELE RA
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