| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2090 |
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| Symbol | |
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| ID | 5200086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2350768 |
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| End bp | 2352000 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581635 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001262587 |
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| Protein GI | 148555005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.106737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.893845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCC AGAGTGCCGG CTTGGGCGAA TATGTCGCGC AGGGGACCAC CCCCGTCGCG
CGGGCGCGGC GGATGCTGGC GATCTTCGTC ATGACGGCGG GCGGCTGCTT CACCGGGCTG
ATGACCACCG CCCTGTCGCC CAGCATGGTC GCGATCAAGG CGCATTTCGG GCATGACGCC
TCCGCCGCGC TCGTCGCGCA GCTCGTCGTC ACCACCGCCA GCCTCGGCGT CGTGATCGGC
GGGCCGGTCG CGGGCTGGCT GATCCAGCGC TTCGGCATCC GCGCCGTGCT GCTGGGGGCG
CTGCCCTGCT ACGGGCTGTG CGGTTCGGCC GGCCTGCTGC TCGAAAGCGC GACCGCGCTG
TTCGCGTCGC GCTTCGGCCT GGGCTTCTGC GCCGCGACGA TCTTCACCGC ATCGGTGACC
CTGCTCGGCG ACAGCTTCGT CGGCGGCGGG CGATCGCGCG TGCTCGGCTT CAAGACGACG
GTGGCGGCGG GCTTCGCGGT GCTGTCGGTG ATGCTGTCCG CGCGGATCGC CGAGGCCGCC
GGCTGGCGCG CGCCCTTCGC CCTCTACGGC GCGACCGCGC TGGCGATGAT GCTGATCGTC
CTGTTCGCGG TCGAGGCCCG CCCGCGCGAG CAGGCGCGGG CCGTGGCGGC GCCGGCCATG
CGCGGGCTGC TGATCCTCTG GCCGGTCTAT GCCATCCTGA TCGCGATATC GGCGATCACC
ATCCTGCAAC AGACGCAGGT GCCGCTGCTG CTCGCATCGG ATCATGACGC GCCGCCGACG
ACGATCGGCT GGGTGATCGC CGGCGGCACC GTCGCCTATA CGATCGCGTC GATCTTCTAC
GGCAGCCTCC ACGTCCGGCT GGGCCCGCGC CGGATGTTCG CGCTGAACCT GGCGCTGATC
GGATCGGGCG TGTCGGTGCT CGGCCTGTCG CACGACCTGC TGCTGTCGGC GGCGGGATGC
CTGCTGCTGG GATCGGGCGG CGGGCTGATG CAGCCCTATC TGCTCAACGT CCTGCTCGAC
CGCACCGCCG CCGAGACGCG CGGCCGGGCG ATCGGGCTGG TCTCGCCGGC GATCAACAGC
GGCCAGTTCC TCAGTCCGCT GCTGTTCTTC CTGCTGTTCG CCGGGCTGGG CGGGCACGGC
GCCTTCCTGA CGATCGGCAT CGTCCTGTTC CTGTCGGCGC TGGCCGGGCT GCGCAGCGGC
GTGCCGGCCG TCCGCGCCGC GCCGGCCACC TGA
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| Protein sequence | MASQSAGLGE YVAQGTTPVA RARRMLAIFV MTAGGCFTGL MTTALSPSMV AIKAHFGHDA
SAALVAQLVV TTASLGVVIG GPVAGWLIQR FGIRAVLLGA LPCYGLCGSA GLLLESATAL
FASRFGLGFC AATIFTASVT LLGDSFVGGG RSRVLGFKTT VAAGFAVLSV MLSARIAEAA
GWRAPFALYG ATALAMMLIV LFAVEARPRE QARAVAAPAM RGLLILWPVY AILIAISAIT
ILQQTQVPLL LASDHDAPPT TIGWVIAGGT VAYTIASIFY GSLHVRLGPR RMFALNLALI
GSGVSVLGLS HDLLLSAAGC LLLGSGGGLM QPYLLNVLLD RTAAETRGRA IGLVSPAINS
GQFLSPLLFF LLFAGLGGHG AFLTIGIVLF LSALAGLRSG VPAVRAAPAT
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