| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2083 |
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| Symbol | |
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| ID | 5196225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2340388 |
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| End bp | 2342526 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581628 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001262580 |
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| Protein GI | 148554998 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.359641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATC GTTCCACCTA TTTCGTCGGC GTCGACGTCG GCGGCACCTT CACCGATCTC
GTCATCGTCT GCAGCCAGAC CGGCGAGGTC CGCAACGTCA AGACGCTGAC CACCCCGACC
GAGCCGGTTC GGGGCGTGAT GAACGCGGTG CGCGAGGCGC TGGCGCTGGT CGGGGCGACG
GGGACGCAGC TCGACCGCGT CGTCCATGCG ACGACCCTGC CGACCAACCT GGTGCTGGAA
CGCAAGGGGG CGAAGGTCGG CTTCGTCACC ACGCTGGGCT TCGGCGACAT GTTCCGGATC
AGCAAGCAGA AGCCGATCGG ATCGAACCGC TACGACCTGA GCTATCGCCG GCCCGAACCG
CTGGTCGCGC GCGGCATGGT CGCCGAGATA TGCGAGCGGA TGGACCATCT CGGCCATGTG
ATCACCCCCC TCGACGTCGC CGACGCCGAG GCGCGGATCG CGGCGCTCGC CGCCAAGGGG
CCCGAGGCGG TCGCGATCTG CCTGATGCAC GGCTATGCCA ATCCCGATCA TGAGCAGCGC
GTGGCCGAGA TCGCCCGCCG CCACATGCCC GATGCCTATG TCTGCATCTC GTCCGACATC
TGGCCCGAAT ATCAGGAATA TGAGCGCGCC TCGACGGCGG TGCTGTCGGC CTATATCGGC
CCGACCTTCT CGGGCTATGT CAACGAGCTG GAACGGGCGC TGCGCGACCT GGGCTATGCC
CGGCCGTTGC AGATCATGCA GTCGAGCGGC GGGGTGATGA CCGCCGCCGC GGCCGCGCGC
AAGGCCGCCT ACATGATCGA GAGCGGCCCC GCCGCCGGCA TCATGGCGAG CGCCGAGCTT
GGCCGCGCCT GCGGCTTCGA CAACCTGATC TCGTTCGACA TGGGCGGCAC CACCGCCAAG
GCCGGCGTCG TCCAGAACGG CCAGCCGCGC ATCACCAACG ACTTCCGCGT CGGCGGCAAG
GCGAGCGCGG GCGGGCGCGA CGCGGGCGAG CCGATCAAGG TGCCGGTGAT CGACCTGGCC
GAGGTCGGCG CGGGCGGCGG ATCGATCGCC TGGGTCGACC GCGGCGGCTT CCTCCAGCTC
GGCCCGGAGA GCGCCAGCTC GGAACCGGGG CCGGCCTGCT ACGGCTTCGG CGGGACCGAG
ATGACGGTGA CCGACGCCAA CCTGCTGCTC GGCTATCTCG ACCCCGATTA TTTCCTCGGC
GGGACGATGA GGATCCATCC CGACCGCAGC CGCGCGGCGG CCGACCGGCT GGCGGCGAAG
CTCGGCATCG ACGCGACCGG GGTGGCGCGC GGCATCCACA TGCTGGCCAA CACCAACATG
GCCTCGGCGA TCCGCATCGT CACGCTCCAG CGCGGCATCG ACCCGCGCGA ATATGTGCTG
ACCGCCTCGG GCGGGGCGGG GCCGCTCCAC GTCGTCGGCG TCGCCGAGCA TTTCGGCATC
CCGACCGTGA TCATCCCGCC GTCGCCGGGG GTCCGCTCCG CCTTCGGGCT GCTCGTCGCC
GACATGGCCT ATGACCAGAT CGCGATGGCG GCGGACGTCT CGGCCGGCGA TTTCGCCGCG
CTCGACGCGC AGTTCGCCCA GCTCGAGGCG GAGGGACGCG CGCAGCTCCG CCGCGACGGG
TTCGAGGAGG GGATCGTCGT CGAGCGCGCG GTGTCGATCC GCTTCGAAAG CCAGGTGCTC
GACCTGACCA TCCCGATCCC CGACGGCCCG GTCGACGCCG CCGTCATCGC CGCCGCCGAG
GCGAGCTTCC GCGAGCTCTA TGCCGCGACC GCCGGGCTGC GGCCGACCGA CCGCTGCACG
CTGGTCCATT GCAAGGTCCG GGTCGTCGCC CATGTCCGCA AGCCCGAGCA GGCGGTCCAC
GCGCCGCGCC CGGGCGACGC CGCCCAGGCG GTGAAGCGGC GGCGGCCAGC CTATTTCACG
GCGGCCGGCG GCTTCGTCGA CACGCCCGTC TATGATCGCG CCCGGCTCGC GCCCGGCGAC
GCCTTCGCCG GTCCCGCGAT CGTCGAGGAG CCCGAGTCCA CGACGATCTG CCCACCCGGC
TATGTCGTCG AGGTCGACCG CCACCTGAAC CTCGTCATCG AGCGCAACGG CCTCGAGGAA
CGGGCTTCGA TCGGGGAAAA TCTGGTCACA TGTCTCTGA
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| Protein sequence | MADRSTYFVG VDVGGTFTDL VIVCSQTGEV RNVKTLTTPT EPVRGVMNAV REALALVGAT
GTQLDRVVHA TTLPTNLVLE RKGAKVGFVT TLGFGDMFRI SKQKPIGSNR YDLSYRRPEP
LVARGMVAEI CERMDHLGHV ITPLDVADAE ARIAALAAKG PEAVAICLMH GYANPDHEQR
VAEIARRHMP DAYVCISSDI WPEYQEYERA STAVLSAYIG PTFSGYVNEL ERALRDLGYA
RPLQIMQSSG GVMTAAAAAR KAAYMIESGP AAGIMASAEL GRACGFDNLI SFDMGGTTAK
AGVVQNGQPR ITNDFRVGGK ASAGGRDAGE PIKVPVIDLA EVGAGGGSIA WVDRGGFLQL
GPESASSEPG PACYGFGGTE MTVTDANLLL GYLDPDYFLG GTMRIHPDRS RAAADRLAAK
LGIDATGVAR GIHMLANTNM ASAIRIVTLQ RGIDPREYVL TASGGAGPLH VVGVAEHFGI
PTVIIPPSPG VRSAFGLLVA DMAYDQIAMA ADVSAGDFAA LDAQFAQLEA EGRAQLRRDG
FEEGIVVERA VSIRFESQVL DLTIPIPDGP VDAAVIAAAE ASFRELYAAT AGLRPTDRCT
LVHCKVRVVA HVRKPEQAVH APRPGDAAQA VKRRRPAYFT AAGGFVDTPV YDRARLAPGD
AFAGPAIVEE PESTTICPPG YVVEVDRHLN LVIERNGLEE RASIGENLVT CL
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