Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2066 |
Symbol | |
ID | 5197609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2320545 |
End bp | 2322629 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640581611 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001262563 |
Protein GI | 148554981 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAAG CGGCGGCTTC CGACGGGCCG GAAGCGGCGC GGCGCGGTTT GACAGCCCGC CGCCGCCGCC GCGAAGCCCG GCGCATGAAC CTCGACCTCA CCGACCAGCA GCGGCTGGTG CGCGACGCCG CCGAACGCTT CTTCGCGGCC GAATGCCCCG CCGACGTGGT GCGCGCGGCC GGCCGCGATG GCTTCTCGGC CGAGCTTTGG GCCAAGGCGG TCGCGGCCGG CTTCGTCGCG ATGCGCGCGC CCGAGGCGGC GGGCGGGGCC GATGCCGACC TGCTGGAGGC GGTGCTCCTT TGCGAACAGG CGGGACGCCG GCTGGCGCCG ATCCCGCTTG CCGATGCCCT TCCCGCCGTG CGCCTGCTCG GGCAGATCGG CGGCGACGTC GCTTCGTTGC AGAATGGCCC GCTGCTGCTC GATGCGATCG CGCCGCCGGT GTTGGGGGAC CGGCACGCGG CGGCGCTGGC TGAACGCGAC CTGCTGTCGG CGGCCTGGCT GGTCGGCGCG GCGCAGGAGG CGGTGGCGAT GGCAGCAGCC TATGCCGCGC AGCGCCGCCA GTTCGGCAAG CCGATCGGTG CGTTCCAGGC GGTCGCGCAT CCGCTCGCCA ACGCCGCGAC CGATCTCGAC GCGGGGCGGC TGCTGGTGTG GCGCGCGATC TGGGCGATCG CCGCCCGGCG TGGCGATGCC GGCGCGTCGA TCGCGATGGC GCGCTGGTGG GCGGCGACGG CGGCGCGGCG CGCGGCGCGG ACGGCGCTGC GCAGCTTCGG CGGCTATGGC CTGTCGCTCG AATCCGACAT CCAGCTCTAT TTCACCGCGA TCAACCGCGC GGCGCTGATC GACGGCGATC CCGAGGCGGC GCTCGCCACG GTCGGCGACC GCCTGTGGGC GGGGGCGGCG ACCGCGCTCC CCGAGACGCG CGATCCGGGG ATCGACTTCG GTTTCGGCGC GGCGGCCGAG CGCTTCGCCA GCGAGGCGCG GCGTTTCTTC GACGCCGAGC TGACCGACGA ACTGCGCGCG ACGGCGCATC ATTCGACCGA CGGCCACGAT CCCGCCTTTC ACCGCAAGCT GGCGGCGGCG GGACTCGCCT ATCCCGACTG GCCGCGCCGC TGGGGCGGGG CGGAGCGCAG CCCCTATGAG GTGTCGGCGC TTGCCCGCGT GTTCGAGGAA TATCGCTGGA CCCGGGTGCC GATCGGCATC ACCAACATGG GCGCGCGGAT GGTGATGCAG TTCGGCTCGT CCGCATTGCA GAAGGAGGTG CTGCCGGGCC TCGCCGAGGG GGCGGCGCTG TCCTGCCTCG GCTTCAGCGA GCCCGATTCG GGATCGGACA TCTATGCGGC GCGCACCCGC GCGGTGCGCG ACGGGGATGA TTGGATCATC GACGGGCAGA AGATGTTCAC CACCGGCGCG CACATCGCCG ACTATGTGCT GCTGCTCGCC CGCACCGATC CGTCGCAGCC CAAGCATCGC GGGCTGACGA TCTTCTTCGT GCCGCTGGCG CTGCCCGGCG TGTCGATCCG GCCGGTCCAC ACCCTCCAGG ACGAGCGCAC CAACATCAGC TTCTACGACC AGGTTCGCCT GCCCGACCGC TACCGGCTGG GGCCGGTCGA CGGCGGCATG ACGGTGATGG CGGCGGCGAT GGCGATCGAG CATGGCGGGG AGGGCTATCA TGTCCTCCAG CACAGCCTGC TCGACGCCGC GCTGCGCTGG GCACGGACGC CGGGCGAGGG CGGGGCGGCG CCGATCGACG ACCGCGCCGT CCGCGCCCGG ATCGCGCGCG TCGCGGCGCA TGTCGAGCTG GCCGACCTGC TCTGCCGCCG CGCCACCTGG GCGGGGGCGA CCGGACAGGC GAGCCGCGCG ACGGGGCCGA TGGCGAAGCT GTTCGCGACC GAAAGCTACA TGGCCGACAC CGCTGACCTG ATGGCGCTGG CCGCCCCCGC CTCGCTCGAT CCCGCCGCCC CGGCGCTGGT CGAGATCGAG GAGAAGCACC GCCAGGCGAT CGGCCAGACC ATCTATGGCG GCACCAGCGA GATCCACCGC ACCATCATCG CCGAACAGGC GCTCGGCCTG CCGCGATCGG GGTAG
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Protein sequence | MGEAAASDGP EAARRGLTAR RRRREARRMN LDLTDQQRLV RDAAERFFAA ECPADVVRAA GRDGFSAELW AKAVAAGFVA MRAPEAAGGA DADLLEAVLL CEQAGRRLAP IPLADALPAV RLLGQIGGDV ASLQNGPLLL DAIAPPVLGD RHAAALAERD LLSAAWLVGA AQEAVAMAAA YAAQRRQFGK PIGAFQAVAH PLANAATDLD AGRLLVWRAI WAIAARRGDA GASIAMARWW AATAARRAAR TALRSFGGYG LSLESDIQLY FTAINRAALI DGDPEAALAT VGDRLWAGAA TALPETRDPG IDFGFGAAAE RFASEARRFF DAELTDELRA TAHHSTDGHD PAFHRKLAAA GLAYPDWPRR WGGAERSPYE VSALARVFEE YRWTRVPIGI TNMGARMVMQ FGSSALQKEV LPGLAEGAAL SCLGFSEPDS GSDIYAARTR AVRDGDDWII DGQKMFTTGA HIADYVLLLA RTDPSQPKHR GLTIFFVPLA LPGVSIRPVH TLQDERTNIS FYDQVRLPDR YRLGPVDGGM TVMAAAMAIE HGGEGYHVLQ HSLLDAALRW ARTPGEGGAA PIDDRAVRAR IARVAAHVEL ADLLCRRATW AGATGQASRA TGPMAKLFAT ESYMADTADL MALAAPASLD PAAPALVEIE EKHRQAIGQT IYGGTSEIHR TIIAEQALGL PRSG
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