Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2059 |
Symbol | |
ID | 5200971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2310043 |
End bp | 2311752 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581604 |
Product | amidohydrolase 3 |
Protein accession | YP_001262556 |
Protein GI | 148554974 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAGA CGACGCGGAC CATGACGATG CTGGCCCTGC TGGCCGGAAC CTTCCTCCTC TCGCCCGCAC GGGCCCAGCT CGAAGGCGCC GCCGCCGAGC CCGCGCCGGT CGCGGCCGAC ACGATGTACG TCAACGCCAG GGTCCGCACG CCCGACGGCT GGAAGACCGG CCTCGCCGTC GCGGGGGAGA CGATCGTCGC GGTCGGCTCA GAGCAGGAGC TTGCCGCCTA TCGGACGCCG AAGACCCATG TCGTCGACCT CGGCGGCGCC ACCGTGCTGC CCGGCCTGGT CGACATGCAC GTCCACGCGG TGAGCGCGGG CCTCGATGCC GCCAATTGCC GCTTCAAGCA GGGCTCCAGG CCCGCCGAGA TCATCGAGAC CGTGAAGGCC TGCGTCGCCC GCGCCAAGCC CGGAAGCTGG ATCGTCGGCG GGCAATGGGA CGGGGCCTCG TTCGGCGCGT CCGCTCCCCA TCGCGCGCTG CTCGACCGAA TCGCGCCGAA CAATCCGGTG CTGCTCCGCG ACGTCAGCCT GCACAGCGCC TGGGTCAACA GCGCCGCGCT CGCGGCCGGC GGGATCACCC GCGACACGCC CAATCCGGAC GGCGGCATCA TCGAGAAGGA CAAGGCCGGC AACCCGACCG GCATCCTGCG CGAACATGCC GCGATGAAGC TGCTCGAAAA GGTGCCGCAG CCCGATACGC CGGCGATGGT CGACGCGCTC CGCTCGGCGA CCCGGACGAT GCTGTCGCTG GGCATCACCA GCTATGAGGA CGCGCTGCTC ACCACGCCCT CGGCCAGGGC CTATGCCGCG CTCGCCGACG CGGGGGAGCT CTACCAGCAT GTCCGCACCT GCATGTGGGA GCCCGACCAG GCGCTGATCG CGTCGCGCAA CCTCTATGCG CGGCCGGGGC TGGAGATGGC CTGCGTCAAG ATGATGCTCG ACGGCGTGCC CACCGATGCG CACACGGCGG CGATGCACGA CGATTATGCC GACACCGCCG GCGTGACCGA TCCCGCGCGG CGCAAGGGCC TGCTGCTCGT CGCGCCCGAC CAGATCTCCG CCAAGATCAC CCGCTATGAC GCCGCCGGGC TGACCGTGAA GCTCCACGCG ACCGGCGACG CCGCCGTCCA TGCTGCGCTC GACGGGATCG AGGCGGCGCG CAAGGCCAAC GGCATCGCCG GCATGCGGCA CGAGATCGCG CATGCGAACT TCGTCCTGCC GGCGGATTTC GCCCGGGCCG GGGCGATCGG CGCGACCTTC GAATTCTCGC CCTATGTCTG GTTCCCCAAT TCGGTGATCA AGGACGTCAT CAAGGCGGTC GGCCCCACGC GGATGGAGCA TTTCAGCCCG GTGAAGAGCG CGCTCGACGC CGCCGTGCCG GTGACGGTCG GCTCCGACTG GCCGGTCGTG CCGGCGGCCG ATCCGTGGCT CGCCATGGAG ACGCTGGTGA CCCGCCAGGC GCCGGGCGGC GTCGGCGATC CGATCTCGCC GCAGGAGCGG ATCAGCGTGG CGCAGGCGGT CGACCTGTTC ACCCGCGCCG CCGCCCGCCA GCTCGGCATC GAGGACCAGG CGGGCAGCAT CGAGCGCGGC AAGCGCGCCG ACCTCATCGT CATCGATCGC GACATCTTCT CGATACCGGC GACCGACATC CACAACACCA AGGTCCTGCG CACCATCATC TCGGGGAAAG AGCGCTACAC GCGCCAATAA
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Protein sequence | MHKTTRTMTM LALLAGTFLL SPARAQLEGA AAEPAPVAAD TMYVNARVRT PDGWKTGLAV AGETIVAVGS EQELAAYRTP KTHVVDLGGA TVLPGLVDMH VHAVSAGLDA ANCRFKQGSR PAEIIETVKA CVARAKPGSW IVGGQWDGAS FGASAPHRAL LDRIAPNNPV LLRDVSLHSA WVNSAALAAG GITRDTPNPD GGIIEKDKAG NPTGILREHA AMKLLEKVPQ PDTPAMVDAL RSATRTMLSL GITSYEDALL TTPSARAYAA LADAGELYQH VRTCMWEPDQ ALIASRNLYA RPGLEMACVK MMLDGVPTDA HTAAMHDDYA DTAGVTDPAR RKGLLLVAPD QISAKITRYD AAGLTVKLHA TGDAAVHAAL DGIEAARKAN GIAGMRHEIA HANFVLPADF ARAGAIGATF EFSPYVWFPN SVIKDVIKAV GPTRMEHFSP VKSALDAAVP VTVGSDWPVV PAADPWLAME TLVTRQAPGG VGDPISPQER ISVAQAVDLF TRAAARQLGI EDQAGSIERG KRADLIVIDR DIFSIPATDI HNTKVLRTII SGKERYTRQ
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