| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2048 |
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| Symbol | |
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| ID | 5199468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2299730 |
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| End bp | 2300479 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581592 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001262545 |
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| Protein GI | 148554963 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCATC ATGATGTTCC ACTATCAAGC AGCACGGGAG ACAGTGCCCG ATCTTTGTGG
CAGACAGCGC TCATGAGCAC GGCTGCCGGG AGATCGATAT CGTCGGGACG GCGGAGCCGG
GCGCGGCCGG CTGGACCGAC GCGGCTTCAA CGCGAGCAGA AGCAGGCGAC GCGCGAGCGG
TTGCTCAAGG CGGCGGAGAA GGTCTTTTCC ACCACTTCCT ATGCGGCGAC CTCGGTCGAG
GAGATCATCG CCGGTGCCGG CGTCGGGCGC ACCTCCTTCT ATCGTCACTT CGACAGCAAA
TGGTCGATCG CGAGCGCGCT CTGCGAGCAG GTGATGCCCG ATGTCTGGGC GCACTGGGAA
GAGTTGTCGC GCCTCGGCGA TCCCGGCGAG GATGCCATCG CGGACTGGCT GCGGCACCGG
GTCGCGCTCT ATGGCCGTCA TCGCGCGCTC TTCGCGGTGA TGAAGGAAGC CGTGGCGATC
GAGGCCAATG GCTTCGACGC GATCGAACAG ATGCATGTCG GCGTGATCGA GGTGCTGTCG
AAGGGGCTTC CGGCCTTCGC GCTGGCCCTC CGGCAAAGCC CCGCCGGCCG GGAGGCAAGG
GTGATGGCCT CGCTGCTGCT GATGCAGCTC GACGAGTTCA ACTATCGGCT GGCAGTCCAC
GGCTGGGACG TCGACTTCGA CGTGGCGGTC CGCATGATGG CGAAGCAGAT TCGCCGGTTT
ATCGAACACA CCGATCCCGA CCGCCGCTAG
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| Protein sequence | MYHHDVPLSS STGDSARSLW QTALMSTAAG RSISSGRRSR ARPAGPTRLQ REQKQATRER
LLKAAEKVFS TTSYAATSVE EIIAGAGVGR TSFYRHFDSK WSIASALCEQ VMPDVWAHWE
ELSRLGDPGE DAIADWLRHR VALYGRHRAL FAVMKEAVAI EANGFDAIEQ MHVGVIEVLS
KGLPAFALAL RQSPAGREAR VMASLLLMQL DEFNYRLAVH GWDVDFDVAV RMMAKQIRRF
IEHTDPDRR
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