| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1987 |
|---|
| Symbol | |
|---|
| ID | 5196350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2227504 |
|---|
| End bp | 2227830 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640581532 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001262485 |
|---|
| Protein GI | 148554903 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAA ATGAGATGAG CCGCTATCAT CCCGCGCTTC CGTTGACCGA ACTGGATGAC
GGGCAGTTGC GCGAGGTCGC GCTCGCGGGA CGGCGGGTGC TGCTCGTCCG GATCGGCGAC
CGGCTCCACG CGGCGTCGAA CGTCTGTCCG CATGCCGGAT CGCCGCTGTC GATGGGCAGG
CTCAGGGGCG ATGCCGTGCA ATGCTCGTTG CACGGCATCC GCTTTCGCCT GTCGGACGGC
GCGATCGTCG GTCGTGCGCT GTGCGATCCT CTCGAAATCT ACGCGACGCG CGTGCGCGAC
GGCATGATCG AGGTCGAACT GCCCTAA
|
|---|
| Protein sequence | MPGNEMSRYH PALPLTELDD GQLREVALAG RRVLLVRIGD RLHAASNVCP HAGSPLSMGR
LRGDAVQCSL HGIRFRLSDG AIVGRALCDP LEIYATRVRD GMIEVELP
|
|---|
| |