Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1980 |
Symbol | |
ID | 5199614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2218222 |
End bp | 2219304 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640581525 |
Product | alcohol dehydrogenase |
Protein accession | YP_001262478 |
Protein GI | 148554896 |
COG category | [C] Energy production and conversion |
COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGTGCTG CCGTGCTGAG GGAATTTCGC AGCGATCTGA TCATCGAGGA TGTCGAGATC GACACGCCGC GCACCGACGA AGTGCTGATC CGCACCGTCG CCTCCGGCCT CTGCCACACC GACCTCACCT ATTGGGGCGG CCGGCATCCC CATCCGCTGC CGATGATCCT GGGGCATGAG GGCTGCGGCA TCGTCGAGGC GATCGGCCCC GGCGTCACCA ACGTCGCGGT CGGCGACGCC GTCGTCACCT GCATGACCAG CTTCTGCGGC CATTGCGACC ATTGCGTCAC CGGCAACCTG GTCCTTTGCG AAAGCGCGGA GCGCGACCGC GCGCCGGACG CACCGCCGAA GATCACCGCC CGGGGCGAGA GGGTGCATCC CTATGGCCGG CTCGGCACCT TCGCGGAGAA GATGCTGATC TACAAGAACA GCTGCGTCCG CATCCGGCCG GACGTGCCGC TGGAGAAAGC CTCGGTGGTC GGCTGCGGCG TGCTGACGGG CGTCGGCGCG GTGATCAACA CCGCCAAGGT GCAGCCGGGC CAGTCGGTCG CCGTGCTCGG TTGCGGCGGC GTCGGTCTCT CGGCGATCAA CGGCGCGGCG ATCGCCGGCG CCGGCCGCAT CATCGCGGTC GACACCCAGC AGGAGAAGCT GGAGCTTTCC CGCGCGTTCG GCGCGACCGA CACCGTGGAC GCGAGCAGCG GCGACGCCGC CCGGCAGGTC GTCGAGATGA CGCGCGGCGG GGTCGACGTG GCGTTCGAGG CGGTGGGCAC GCCGCAAACC GCCCAGGCCG CCTTCGGCAT GATCCGCCGG GGCGGCGCGA TGATCCTCGT CGGCATGCTG CCGCCCGACG AGACCGTGTC CTTTCCCGGC AAGGAGTTCG TCTACGGCAA GAAGGTCATC GGCAGCATGC TGGGATCGAA CCGCTTTCCC CACGACATCC CGAAGCTCAT CGACTTCTAT ATGCAGGGCA AGCTCAAGCT CGACGAACTC GTCTCCCAGC GCATCGCGCT GGACGAGGTG AACGCGGCGC TCCAGCAGGT CGGCAAGGGC GGGGTCGCGC GCTCGGTCAT CATCTTCGAA TGA
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Protein sequence | MRAAVLREFR SDLIIEDVEI DTPRTDEVLI RTVASGLCHT DLTYWGGRHP HPLPMILGHE GCGIVEAIGP GVTNVAVGDA VVTCMTSFCG HCDHCVTGNL VLCESAERDR APDAPPKITA RGERVHPYGR LGTFAEKMLI YKNSCVRIRP DVPLEKASVV GCGVLTGVGA VINTAKVQPG QSVAVLGCGG VGLSAINGAA IAGAGRIIAV DTQQEKLELS RAFGATDTVD ASSGDAARQV VEMTRGGVDV AFEAVGTPQT AQAAFGMIRR GGAMILVGML PPDETVSFPG KEFVYGKKVI GSMLGSNRFP HDIPKLIDFY MQGKLKLDEL VSQRIALDEV NAALQQVGKG GVARSVIIFE
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