| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1940 |
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| Symbol | |
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| ID | 5196368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2173611 |
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| End bp | 2174879 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 640581485 |
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| Product | Fmu (Sun) domain-containing protein |
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| Protein accession | YP_001262438 |
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| Protein GI | 148554856 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCTG ACTCCACCGG AACCCCCGCC CGCCGCGCCG CCCTGCGGCT GCTCGATGCC
GTGCTGCGCC GCGGCCTGCC GCTCGAAGCC GCGATGGACG GCGCCTGCGC CGATCTCGAC
CGGGCCGACG ATCGCGGCTT CGCCCATGCC ATCGCCGCCG AGGTGCTGCG CCGCACCGCC
GATCTCGACG CGCTGATCGA CGGCGCGACC GAGCGTCCGC TCCCCGCCGA CGCCAAGGCG
CGGATGGTGC TGCGCATCGC GCTCGCCCAG GCGCTGGCGC TCGGCACGCC GGGCCATGCC
GCGATCACGA CGGTGCTGCC GCTGGTCGAC GGCGGCCCGC GCAAGCTGGT CCATGCCGTG
TTCGGCGCGG TGATGCGCGA CGGCGCGGCG CTTCCCGATC CGCCCCATTT GCCGCCGGCC
GTCGCCGATC GCTGGGCCGC GAGCTGGGGC AAGGACGCCG CCGAGGCCGC GCGCGCGTCG
CTCGGCGGAC CGCCGCCGGT CGACCTGACG CTCAAGCCCG ACGCCGACAC CGCCGACTGG
GCCGCGCGGC TCGACGGCGA AAGCCTCGCC CCCGGCCATG TCCGCATCGC GGCGGGGCGG
CGGATCGTCG ACCTGCCCGG CTATGACGAG GGCGCCTGGT GGGTGCAGGA CATCGCCGCC
GCGATCCCCG CGCGGCTGCT CGGCGCGGGC GAGGGCCGCC GCGCGCTCGA CCTGTGCGCC
GCGCCCGGCG GCAAGACGAT GCAGCTCGCC GCCGCCGGCT GGGCGGTGAC GGCGGTCGAC
CTGTCCGAGG CGCGGATGGC GCGGCTCGCC GAGAATCTGG AACGGACCGG CCTTGCCGCC
GAGGCCCGCA TCGCCGACGC GGCGGCCTTC GCCGAGGGCG CGCCCTATGA CGCGGTGCTG
CTCGACGCGC CCTGCTCGGC GACCGGCATC TTCCGCCGCC ATCCCGACGT GCTCCACCGC
GCCGGTCCCC GCATCGTCGC CGAAGCGGCC GAGCTGCAGG CGCGGCTGAT CGACCATGCG
GCCGGGCTCG TCGCGCCGGG CGGGCGGCTG GTCTACGCGG TCTGCTCGCT GGAGGCCGAC
GAAGGGGAGC AGATCGCCAA GGGCTTCGCC GCGCGCCATC CCGACTGGGC GATCGACCCG
GTCGCCACGG ACGAGCTGCC GCAGGGCTTC GCCCCCGACA AGGTCGGCCG CGTCCGGGTC
CGCCCCGGCA CCCTCGCCGA TCGCGGCGGC GCCGACGGCT TCTTCGTCGC GCGCTTCCGG
CGATCCTAA
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| Protein sequence | MTSDSTGTPA RRAALRLLDA VLRRGLPLEA AMDGACADLD RADDRGFAHA IAAEVLRRTA
DLDALIDGAT ERPLPADAKA RMVLRIALAQ ALALGTPGHA AITTVLPLVD GGPRKLVHAV
FGAVMRDGAA LPDPPHLPPA VADRWAASWG KDAAEAARAS LGGPPPVDLT LKPDADTADW
AARLDGESLA PGHVRIAAGR RIVDLPGYDE GAWWVQDIAA AIPARLLGAG EGRRALDLCA
APGGKTMQLA AAGWAVTAVD LSEARMARLA ENLERTGLAA EARIADAAAF AEGAPYDAVL
LDAPCSATGI FRRHPDVLHR AGPRIVAEAA ELQARLIDHA AGLVAPGGRL VYAVCSLEAD
EGEQIAKGFA ARHPDWAIDP VATDELPQGF APDKVGRVRV RPGTLADRGG ADGFFVARFR
RS
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