Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1939 |
Symbol | |
ID | 5196367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2172603 |
End bp | 2173553 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581484 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001262437 |
Protein GI | 148554855 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC TGAAGACGAC GATGCTGCTG GCGGCGCTCA CCGCGCTGTT CATGGCGCTC GGCTTTACGA TCGGCGGGAC CGGCGGGGCG ATGATCGCGC TCGTCGTCGC GGCGGGCATG AACCTCTTCA CCTTCTGGAA CGCCGACAGC ATCGTCCTGC GGATGCACGG CGCGCGCGAG GTCGATGCGC AGAACTGCCC CGAATTCGTC GGGCTGGTCG CCGGGCTGGC GCGCCGGGCC AACCTGCCGA TGCCGCGCGT CTACATCATC GACAGCGAAC ACCCCAACGC CTTCGCCACC GGCCGCAACC CCGAGAACGC GGCCGTCGCC GCGACCACCG GCCTGCTCGC CATCCTCAAC CGCGACGAGA TCGAGGGCGT GATGGCGCAC GAGCTGGCGC ATGTCCGCAA CCGCGACACG CTGATCATGA CGATGACCGC GACGATCGCC GGCGCGATCT CGATGCTCGC CAATTTCGGC ATGTTCTTCG GCGCCGGCCG CCGCGACGGC GGACAGGTGC TGGCGACGAT CCTGGCGGTG TTCGTCGCCC CCTTTGCGGC GATGATCGTG CAGATGGCGA TCAGCCGCGC CCGCGAATAT GGCGCCGATC GCGGCGGGGC CGAGATTTCG GGCAAGCCCC AGGCACTCGC CTCGGCGCTC GCCAAGCTCG CCAACGGGGC CGCGCGCATC CCCAACCCGG TGGTCGAACG CAACCCGGCG GCGGCAGCGC TCTACATCGT CCCCGGCATG AAGCGCGACG GCGACAGCCT GTTCGCCACC CACCCGGCGA CCGAGAACCG CATCGCCCAT CTCGAGGCGA TCGCCAACGA GATGGGCGTG TCGAGCCCGT CGCCCAATTT CGCGGCGCTT TCGGAACGGC GCGGGTCGGT CTCCTCGGTG CCGCGCACCC GGCGCCGCTC CAGTGCGCTC GATCCGAACG GACGAGGCTA G
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Protein sequence | MNMLKTTMLL AALTALFMAL GFTIGGTGGA MIALVVAAGM NLFTFWNADS IVLRMHGARE VDAQNCPEFV GLVAGLARRA NLPMPRVYII DSEHPNAFAT GRNPENAAVA ATTGLLAILN RDEIEGVMAH ELAHVRNRDT LIMTMTATIA GAISMLANFG MFFGAGRRDG GQVLATILAV FVAPFAAMIV QMAISRAREY GADRGGAEIS GKPQALASAL AKLANGAARI PNPVVERNPA AAALYIVPGM KRDGDSLFAT HPATENRIAH LEAIANEMGV SSPSPNFAAL SERRGSVSSV PRTRRRSSAL DPNGRG
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