Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1887 |
Symbol | |
ID | 5199508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2114128 |
End bp | 2115528 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581432 |
Product | glucuronate isomerase |
Protein accession | YP_001262385 |
Protein GI | 148554803 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1904] Glucuronate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.40898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGCAG CCCCGCTCCG GCTCCATCCC GACCGGCTGT TCCCGGCGGA CCCCGATACC CGCGTGGTGG CGCGGCGGCT CTACGCCGAA GTCGCCGGCC TGCCGATCGT CAGCCCGCAC GGCCATACCG ATCCGCGCTG GTTCGCCGAG GATGCGCCGT TCGGCGATGC GAGCAGCCTG CTGCTCCAGC CCGACCATTA TGTCTTCCGC ATGCTGTACA GCCAGGGCGT CCCGCTCGAG GCGATCGGCA TCGGCGCGCC GGTCGATCCG CGCGCGGCGT GGCGCGTGCT GGCCGATCAC TACCATCTGT TCCGGGGCAC GCCGTCCCGG CTGTGGCTCG ACTGGGTGTT CCACAGCGTG TTCGGGCTCG ACGTGCGGCT CGCGCCCGAG ACCGCCGACC TTACTTTCGA CAGCATCAAC GAGCAGCTTG CCCGCCCCGA ATTCCGCCCG CGCGCGCTGT TCGACCGGTT CAACATCGAG CTGCTGGCGA CGACCGAGTC CCCGCTCGAC CCGCTCGACC ATCATGCCGC GATCCGGGCC TCGGGATGGA CGGGCCGGGT GATCACCGCC TTCCGGCCCG ATCCGGTGGT CGATCCCGAT TTTGAGGGGT TCGCGGCCAA TCTCGACCGG CTCGGCGCGA TGACCGGCGA GGATGTCGGC AGCTATGCCG GCTATCTCGC CGCGCTGCGC GCCCGCCGCG CCGCCTTCGC GGCGGCGGGG GCGACCTCGA CCGACCATGG CCATCCGACC GCCGCGACCG CCGACCTCGA TCGCGGCGAG GCCGAGCGCC TCTACGCCCA GGTGCGCGGC GGCGGGGCGA CGGCCGAGCA GGCCGAGCTG TTCCGCGCGC ACATGCTGAC CGTCATGGCG GAGATGAGCA TCGACGATGG ACTGGTCATG CAGATCCATC CGGGCTCCTT CCGCAACCAT AATGCCGATC TGTTCCGGCG CTTCGGGCGC GACAAGGGCG CCGACATCCC GACCCGCACC GATTTCGTCC GCGCGCTGCG GCCGCTGCTC GGCCGCTTCG GCAACGATCC CCGGCTCAGC CTGATCCTGT TCACGCTCGA CGAGAGCGCC TATGCGCGCG AGCTGGCGCC GCTCGCCGGC CATTATCCGG CGCTCAAGCT CGGTCCCGCC TGGTGGTTCC ACGACAGCCC GGAGGGGATG CGCCGCTTCC GCCGGCAGAC CACCGAGACC GCCGGCTTCC ACAACCTCGT CGGGTTCAAC GACGACACCC GCGCCTTCCT GTCGATCCCG GCGCGGCACG ACGTCGCCCG GCGGATCGAC TGCGGCTATC TCGCCGAGCT GGTCGTCGAG CATCAGCTCG ACGAGGACGA GGCGGCCGAT CTCGCGGTCG ACCTCACCTA TCGGCTGGTC AAGTCGGCCT ACCGCCTGTG A
|
Protein sequence | MTAAPLRLHP DRLFPADPDT RVVARRLYAE VAGLPIVSPH GHTDPRWFAE DAPFGDASSL LLQPDHYVFR MLYSQGVPLE AIGIGAPVDP RAAWRVLADH YHLFRGTPSR LWLDWVFHSV FGLDVRLAPE TADLTFDSIN EQLARPEFRP RALFDRFNIE LLATTESPLD PLDHHAAIRA SGWTGRVITA FRPDPVVDPD FEGFAANLDR LGAMTGEDVG SYAGYLAALR ARRAAFAAAG ATSTDHGHPT AATADLDRGE AERLYAQVRG GGATAEQAEL FRAHMLTVMA EMSIDDGLVM QIHPGSFRNH NADLFRRFGR DKGADIPTRT DFVRALRPLL GRFGNDPRLS LILFTLDESA YARELAPLAG HYPALKLGPA WWFHDSPEGM RRFRRQTTET AGFHNLVGFN DDTRAFLSIP ARHDVARRID CGYLAELVVE HQLDEDEAAD LAVDLTYRLV KSAYRL
|
| |