| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1878 |
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| Symbol | |
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| ID | 5197948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2102763 |
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| End bp | 2104334 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581423 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001262376 |
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| Protein GI | 148554794 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.215591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC AATGGGACGT CGTCGTCATC GGCAGCGGCA TCAATTCGCT GGTCTGCGCC
GCCGAACTGG CGCTGAAGGG GCGCCGCGTG CTGGTGCTCG AACGCGACGA GGTCGCCGGC
GGCTGCATGC GCACCGCCGA GGCGACCCTG CCCGGCTTCC GGCACGACCT GTTCGCGATG
TCGCTGCCGC TGTTCGTCAC CGCCGCCCAT TATCCGCTGC TCGGCCCGAA GCTCGCCGAA
CGGGGCCTGC GCCTGCTGAC CGCGCCGCAG CCGACCGCGG TGGTGCTCGA CGACGGGCGG
ACGGCCGTGT TCGGCCCGTC GCGCGAGGCC AATGCAGCGA TGTTCGATTC GCTCCATCCG
GGCGACGGCG CCGCCTATGT CCGCGCGATG CGGGAGATCG AGGCCAACGC CCCGCTGATC
TTCGGCCTGC TCGGCCAGGA GCCCCGCAGC CGCGGGACGC TGGGCCTGCT CGCCCGCACC
CTGCTGCGCG AGCGGATCGA CGGCCTTGCC GGGCTGACCG GCGATTTCCT GCGGCCGATG
CGCGCCTGGC TCGAACAGGA TTTCGGATCG GACCTCGCCC GCGCGCTGAT CGCGCCGTGG
ATTCTCCACA CCGGGCTCGG CCCCGACGCG CCGCTGTCGG CGCTGATGGG CAAGCTGATC
CTGTTCACGC TCGAAGCGGT CGGCATCCCC TTCGTCGAGG GCGGCATCGC GCAGCTCGTC
GCCGCCTTCA CCGCGCTGAT CGAGGCGCAG GGCGGGCAGG TCGAGACCGG CGCCGACGTC
ACCCGCATCC TCGTCGAGCG CGGCGCGGCG ACCGGCGTCG AGACCGCCGA TGGCCGGCGC
ATCGCGGCGC GCCGGGGCGT GGTCGCCAAC GTCACCCCGA CCCAGCTCTA CGGCCGGCTG
CTGTCCGATC CCCCGCCCGC GCAGGCGGAG CGCGCGCGCC GCTACGTCTA TGGCCGCGCC
GACATGCAGA TCCACCTCGC GCTGTCCGAG CCGCCGCGCT GGCGCGATCC GTCGCTCGAC
GCGGTCGCGC TGATCCACGT CACGCCGGGG CTCGACGGCG TCTCGCGAGC GGTGAACGAG
GCCGAGCGCG GCCTGCTGCC GGTCGAAGGG ACGATCGTCG TCGGCCAGCC GGCGGCGACC
GACCCGTCGC GCGTCCCGCC GGGCCAGGGG CTGCTCTGGA TTCAGCTCCA GGAACTGCCG
CGTCAGGTGC GGGGCGACGC CGCCGGACTG ATCGCGCCGC CCGCCGACGG CCGCTGGTCG
CCCGCGCTGG CCGAAGCCTA TGCCGCGCGC ATCCTCGACC GGCTGCGCGG CTGCATCGCC
AATCTCGACG GCGCGCTGCT GAAGACGGCG ATCCTGTCGC CGGCCGATCT CGAGGCGATG
AACATCAACC TGGTCGGCGG CGATCCCTAT TCGGGCGCCT GCTCGATCGA CCAGTTCCAC
CTGTTCCGCC CGCTCGCCGG CGGCCGCAAC CACGACACGC CGGTGCGCCG GCTGTTCCAT
ATCGGCGCGT CGACCCATCC CGGGCCGGGG CTCGCCGGCA TGTCGGGCCA TATGGTGGCG
GCGCGGCTTT AA
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| Protein sequence | MNAQWDVVVI GSGINSLVCA AELALKGRRV LVLERDEVAG GCMRTAEATL PGFRHDLFAM
SLPLFVTAAH YPLLGPKLAE RGLRLLTAPQ PTAVVLDDGR TAVFGPSREA NAAMFDSLHP
GDGAAYVRAM REIEANAPLI FGLLGQEPRS RGTLGLLART LLRERIDGLA GLTGDFLRPM
RAWLEQDFGS DLARALIAPW ILHTGLGPDA PLSALMGKLI LFTLEAVGIP FVEGGIAQLV
AAFTALIEAQ GGQVETGADV TRILVERGAA TGVETADGRR IAARRGVVAN VTPTQLYGRL
LSDPPPAQAE RARRYVYGRA DMQIHLALSE PPRWRDPSLD AVALIHVTPG LDGVSRAVNE
AERGLLPVEG TIVVGQPAAT DPSRVPPGQG LLWIQLQELP RQVRGDAAGL IAPPADGRWS
PALAEAYAAR ILDRLRGCIA NLDGALLKTA ILSPADLEAM NINLVGGDPY SGACSIDQFH
LFRPLAGGRN HDTPVRRLFH IGASTHPGPG LAGMSGHMVA ARL
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