| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1867 |
|---|
| Symbol | |
|---|
| ID | 5199273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2090547 |
|---|
| End bp | 2091989 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640581412 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001262365 |
|---|
| Protein GI | 148554783 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.445197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.594609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC GGGCGTCCCC CTTCCCCTCT CTCCGCCGGA CGCTTCCGGG CCTCCTCCTG
CTCGCGGGGG TTTCGGCCCC CGCGAGCGCC GCGATCCAGC CGCACGTCAA CCAGACGCAG
GGGCAGCCGG TGTCGGGATG CACGGCGCGC ACCGAGAACC TGAAGCCGCC GCAGGTGCCG
TTCGGGCAGC AGAACCCGGT GGCGGAGGAC AAGGCCTATG TGCTGCGCGC CGCCCGGATC
CTCGAGCCGG CGAGCGGGCA GGTGACGCAG GGCGGCTATG TCGTGGTGCG CGGCACGTGC
ATCCTCGGCG TCAACGCCGC GATCCCGGCC GGCGCCGAGA CGGTCGAGCT GGGCGACGTC
ACGCTGATGC CGGGGCTGAT CGATCTGCAC ACCCATCTCT TCCTGCGCGA CGAGGATCAG
GTCTGGCCCT ATTCGATCCT GTGGAAGACC AGCCCCTATC GGACGATCGA GGGCGTCGAC
GCGGCGATCA AGACGCTCAA CATCGGCTTC ACCACGGTCC GCGACCTCGA TGACGAGGGG
GCGCTCGATT CCGACACGGC GCTGCGCGAC GCGATCGCGC GGGGCGTCGT GCCGGGGCCG
CAGATGATCG TCGCCGGGGT GCCGCTGACC ATCACCGGCG GCGACATGAA CCTGCCGCTG
GTCAACCCCG AGATCCAGCC GCACGTCCCG CAGCCGGCGG AGATGATCGA CAGCGACGCC
GCGATCGTCC CGGCGGTGCG CGAGCGGATC AAGCGCGGCT CGGACCTGAT CAAGGTCTAT
GTGACGAGCA CCCGGCGGCA GACCGACCCG GTGACGATGA TGCCGTTCAG CCAGTTCGAC
GTGCAGCAGA TGCGCACGAT CGTCCAGGAA GCCCATCGCT ACGGCCGCGA CGTCGCGGCG
CATGGCTATG GCGGCCCCGC CGTCGAGGCG GCGGTCGCGG CCGGCGTGCG GACCATCGAG
CACGGCCCGC TGCTCACCGA CCAGAACATC GCCTCGCTCG CCAAGTCGGA CACCTATTGG
GTGCCGACCC TGATCACCTA TGCGGTGCGT CAGAACACCG ATTTCGAGAA GCGCTTCGTC
GCCCACCATC GCGACGCCTT CCGCAAGGCG CTCAAGGCCG GGGTCAAGAT CGGCTTCGGC
ACCGACGTCG GCTCCTTCCC GCACGGCACC CAGAATGGCG AGTTCGACCT GATGGTCAGC
TATGGGATGA AGCCGCTCGA CGCGATCCGC GCGGCGACCT CGGTCGCGGC GACGGTGCTG
CGGCTCGACG GCCAGGTCGG CACGCTCGCC GCCGGGTCGG ACGCTGACAT CGTCGCGGTC
GCGGGCGATC CGCTCCAGGC GATCGCCGAC ATCCACAAGG TCCGCTTCGT GATGACCGAC
GGGCGGATCT TCCGCAACGA CGTCACCGAC CAGCGCTTCG ACTGGGAATG GTCGCGCCGA
TGA
|
|---|
| Protein sequence | MARRASPFPS LRRTLPGLLL LAGVSAPASA AIQPHVNQTQ GQPVSGCTAR TENLKPPQVP
FGQQNPVAED KAYVLRAARI LEPASGQVTQ GGYVVVRGTC ILGVNAAIPA GAETVELGDV
TLMPGLIDLH THLFLRDEDQ VWPYSILWKT SPYRTIEGVD AAIKTLNIGF TTVRDLDDEG
ALDSDTALRD AIARGVVPGP QMIVAGVPLT ITGGDMNLPL VNPEIQPHVP QPAEMIDSDA
AIVPAVRERI KRGSDLIKVY VTSTRRQTDP VTMMPFSQFD VQQMRTIVQE AHRYGRDVAA
HGYGGPAVEA AVAAGVRTIE HGPLLTDQNI ASLAKSDTYW VPTLITYAVR QNTDFEKRFV
AHHRDAFRKA LKAGVKIGFG TDVGSFPHGT QNGEFDLMVS YGMKPLDAIR AATSVAATVL
RLDGQVGTLA AGSDADIVAV AGDPLQAIAD IHKVRFVMTD GRIFRNDVTD QRFDWEWSRR
|
|---|
| |