Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1864 |
Symbol | |
ID | 5200007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2087433 |
End bp | 2088632 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640581409 |
Product | diaminopropionate ammonia-lyase |
Protein accession | YP_001262362 |
Protein GI | 148554780 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0500959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.41026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTGC TGAATGAACT TCCAGAGAAA AATCGATCTA TTTCGGAAAT GGATCGGCTC ATGCTGGGCC GGGAGGCGCC CGGACAGGTG TTGTCCTATC TGCGCCTGTG CCCCGATTAT GCGCCGACGC CCTTGTTCCG GCTGCCTGCG CTCGCTGCGG CGCTCGGCAT CGGCGGGCTG CGGATCAAGG ACGAGGGCGC GCGGCTGGGG CTAGGCAGCT TCAAGGCGCT GGGCGGCGCC TATGCCGTGA TCCGGATCAT CGCCGAGATG GCCGAACGGG CGCTGGGCCG GCCGATCGAC CCGGCGATGC TGACGGCGCC CGAGGTCCGC GCGATCGCGG CGGGCGTCAC GGTCGGCTGC GCGACCGACG GCAACCATGG CCGCTCGGTT GCGGCGGGGG CGCGGCTGAT GGGCGCGCGG GCGGTCATCT TCCTCCACCG CGGCGTGTCG GCCGAGCGCG AGGCGGCGAT CGCCGCGCTC GGCGCGACGA CGGTGCGCGT CGAGGGCAAT TACGACGATT CGGTCGCCCA TGCGCTGCGC GTCTGTTCGG AGCGCGGCTG GCCGGTGGTG TCCGACACCT CCTGGCCCGG TTATGAGGCG ACCCCGCTGC GGGTGATGCA GGGCTATACC GCGATGTTGC GCGAGGTGCT CGACGCCGCT CCCGTGCCGC CCAGCCATGT CTTCATCCAG GCCGGCGTCG GTGGGGTCGC GGCGGCGATC GCGGCGCATC TGTCCGAGGT GTGCGGCGAC GCCATGCCCC GGATCGTCGT GGTCGAGCCC GAGCGGGCGG CCTGCCTGCT CGAAAGCGCG CGGCGCGGAA AGGTCGGGCC GATCCCCCAT GGCGAACCCA CGCTGATGGC GATGCTCGAA TGCTACGAGC CGTCGCCGGT CGCCTGGCGC ATCCTCGCCC GGACCGCCCA TGCCTTCATG ACCGTCGGGG AGGAGGATGC GGCGGCCGCG ATGCGGCGCC TCGCGCGTCC GATCGACGGC GACCCGGCGA TCGTCGCGGG CGAGAGCGGC GGCGTCGGCC TCGCCGCGCT GCTCAGCGTG GCGGACGACG CGGAGGCCCG CCGCCTGCTC GACCTCGGCC CCGATGCGGA GGTGCTGCTG TTCAACACCG AAGGCGCCAC CGATCCGGGC ATCTACCGGT CGATCACCGG GATCGAGCCG GACGCGCTGC TCGCGGCGGC CCGGTCGTGA
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Protein sequence | MILLNELPEK NRSISEMDRL MLGREAPGQV LSYLRLCPDY APTPLFRLPA LAAALGIGGL RIKDEGARLG LGSFKALGGA YAVIRIIAEM AERALGRPID PAMLTAPEVR AIAAGVTVGC ATDGNHGRSV AAGARLMGAR AVIFLHRGVS AEREAAIAAL GATTVRVEGN YDDSVAHALR VCSERGWPVV SDTSWPGYEA TPLRVMQGYT AMLREVLDAA PVPPSHVFIQ AGVGGVAAAI AAHLSEVCGD AMPRIVVVEP ERAACLLESA RRGKVGPIPH GEPTLMAMLE CYEPSPVAWR ILARTAHAFM TVGEEDAAAA MRRLARPIDG DPAIVAGESG GVGLAALLSV ADDAEARRLL DLGPDAEVLL FNTEGATDPG IYRSITGIEP DALLAAARS
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