| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1848 |
|---|
| Symbol | |
|---|
| ID | 5199160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2069023 |
|---|
| End bp | 2069994 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581393 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001262346 |
|---|
| Protein GI | 148554764 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | [TIGR03213] 2,3-dihydroxybiphenyl 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATAC GCAGCCTGGG CTACATAGGC TTCGGCGCGC CCGATCCGGC GGCCTGGCTC
CGCTACGGCA CCGATATCCT CGGCCTGATG CCCGCCCGCG CGCTGGCCGG CGAGGATTGG
GGCATACCCG CCATTCCCGG CTCCGGCCCG AAGAGCGGCG GCAGCGGCAT CGCCGAGGAC
GGAAGCGTCT ATCTGAAGAT GGACGACTGG CAGTGGCGGA TCGCCGTCCA CCCCGACGAC
ACCAACCGCG GCGTCAAATA TCTCGGCCTC GAGGTCGAGG ACGAGGCCGA CCTCGCCGCC
CATGTCGCCA GGCTGCGCGA GGCCGGCTTC GTCGCCGAGA TGGGCTCCGC CGAACAGGCC
GAGGCGCGTT CGGTGAGCGG CATCGCCCAT ACGACCGACC CCTGCGGCAA TGCGATCGAG
CTGTTCCACG GCCCGACCGT CGACCGGAAA TTCCAATCGC CGCTGGGGAT GGAGTTCCTC
GCCGGCCCGC TCGGCATCGG CCATGTCAAC CTGCTCACCT CGAACCGGCT GGCGGCGGCC
CGGGACTTCT ACATGCGCGC CCTGGGCTTC CGGCTGGCCG ACTATATCGC GTTCGGCGGC
GGCAATTCGG CCAATTTCTA TCGCTGCAAC CCGCGCCACC ATTCGATCGG GCTGCTCGAA
GTCGGCCGCG CGATCGGCGT CCATCACCTG ATGCTGGAGG TCACCAAGGT CGACATGGTG
CTCCAGTGCC TCGAACGCGT GACCGACGCG GGGATCGCCG TGACCTCGAC GGTCGGCCGG
CACGTCAACG ACAACATGCT GTCCTTCTAC ATGCGCAGCC CCTTCGGGTT CGAGGTCGAG
ATCGGCTTCG ACGGCCGGCT GCTCGACGAG GACTGGACGC CGAACCGCTT CGTCGAGGGC
GACATATGGG GCCATCGCGG CCTCGATCCC GAGACGATCG CCAGGAACCT CGCCGCGATG
CCGCAGGGAT AG
|
|---|
| Protein sequence | MTIRSLGYIG FGAPDPAAWL RYGTDILGLM PARALAGEDW GIPAIPGSGP KSGGSGIAED
GSVYLKMDDW QWRIAVHPDD TNRGVKYLGL EVEDEADLAA HVARLREAGF VAEMGSAEQA
EARSVSGIAH TTDPCGNAIE LFHGPTVDRK FQSPLGMEFL AGPLGIGHVN LLTSNRLAAA
RDFYMRALGF RLADYIAFGG GNSANFYRCN PRHHSIGLLE VGRAIGVHHL MLEVTKVDMV
LQCLERVTDA GIAVTSTVGR HVNDNMLSFY MRSPFGFEVE IGFDGRLLDE DWTPNRFVEG
DIWGHRGLDP ETIARNLAAM PQG
|
|---|
| |