Gene Swit_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1827 
Symbol 
ID5198038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2044790 
End bp2045647 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID640581373 
Productalpha/beta hydrolase fold 
Protein accessionYP_001262326 
Protein GI148554744 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC CGTTGCTGCC ACGGGGCCAG GAGGTCGCCG TCGGCGAACA CCGCATCCAT 
TATCTGAGCT ATGGCGAGGG CCCGGCGGTC GCGTTCCTGC ACGGGAGCGG GCCGGGGGCG
AGCGGCTACA GCAATTTCAA GCAGAACATC GACGCGATCG TGGCGGCGGG GCGCCGGGCG
ATCGTCCTCG ACATGATCGG CTTCGGCCAT TCGAGCAAGC CGGTCGGCTG CGACTACACC
ACCGACCTGT TCGCGCGGAC GATCCGGCAG GCGCTCGACG CGATCGGCGT CGGACGCTGC
GTGCTGGTCG GCAACTCGCT CGGCGGCGCG GTCGCGATCC GCATCGCCCT CGACGATCCC
GAACGCGTCG AGGGACTGGT GCTGATGGCG CCCGGCGGCA TCGAGGAGAA CGAGGTCTAT
TATGCCATGC CCGGCATCCG CAGCATGGTG TCGGCCTTCG TCGGCGGGAC GCTCGACCGG
GAAGGGTTGC GGTCGCTGCT GCGCATGCTG GTCCACGATG CGTCGCTGGT CGACGACGGG
CTGGTCGACG AACGGTTCGA GGTCCTTCGG ACCCAGCCGG TCGAGGTGCT GTCGCGGCTG
AAGGTGCCGT CGATGGCGCA CGAACTGGGC AATATCCGCT GCCCCATCCT CGGCTTCTGG
GGGCGGGAGG ACCAGTTCAC GCCGATGTCG GGCTTCTCGA AATTCCTCGA TGCCAGCCCG
GACTGCGCGT TCACGCTCCT GTCGAACTGC GGCCATTGGG TGATGGTCGA GCAGGCCGGG
CTGTTCAACG CCCATCTCCA GCATTTCCTC ACCGCGCGGA TGGGTGCCGC CCGGCAAGCG
GAGGCCGTCG GCCCATGA
 
Protein sequence
MPEPLLPRGQ EVAVGEHRIH YLSYGEGPAV AFLHGSGPGA SGYSNFKQNI DAIVAAGRRA 
IVLDMIGFGH SSKPVGCDYT TDLFARTIRQ ALDAIGVGRC VLVGNSLGGA VAIRIALDDP
ERVEGLVLMA PGGIEENEVY YAMPGIRSMV SAFVGGTLDR EGLRSLLRML VHDASLVDDG
LVDERFEVLR TQPVEVLSRL KVPSMAHELG NIRCPILGFW GREDQFTPMS GFSKFLDASP
DCAFTLLSNC GHWVMVEQAG LFNAHLQHFL TARMGAARQA EAVGP