Gene Swit_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1813 
Symbol 
ID5200571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2027963 
End bp2028475 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID640581359 
Producthypothetical protein 
Protein accessionYP_001262312 
Protein GI148554730 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG CGATCGCCCT CGCCCTGGCC GCCGCCGCCA TGCCCCCATC CACCCCGGAT 
CTCGGCAAGC GCGAAGGCGC CTGCCGGCCG AACGAGCCTG GCCCGGCGCT GCTGATCGAC
GTGGTCGGCC TCAAGGATCG CTCGGGACTG CTCCGCGCCG AACTCTATCC GGCGGTCGAC
GGGGATTTCC TGGCCGACGA CAATGTCCTG ATCGCGGCGG GCAAGACCTT CGCGCGGGTC
GACATGGCGG TGCCGCACAG CGGGCCGGTC CGGCTCTGCA TCCGCGTGCC GCGTGCCGGC
CGCTACGCGC TCTCGCTGCT CCACGATCGC AACGCCAACC TGAAGTTCGA CCTGTCGGGC
GACGGCATCG GCTTTCCCGG CAACCCGACG CTCGGCTGGT CGAAGCCGCG CGCCGACAAG
GCCGCGTTCC AGGCGGGACC CGGCCTCACC ACCATCGAGA TCCGGCTCAA CTATCGCCGC
GGCCTCGCCA TGCGTCCCCT GGAGGATCGA TGA
 
Protein sequence
MSLAIALALA AAAMPPSTPD LGKREGACRP NEPGPALLID VVGLKDRSGL LRAELYPAVD 
GDFLADDNVL IAAGKTFARV DMAVPHSGPV RLCIRVPRAG RYALSLLHDR NANLKFDLSG
DGIGFPGNPT LGWSKPRADK AAFQAGPGLT TIEIRLNYRR GLAMRPLEDR