Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1801 |
Symbol | |
ID | 5200735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2013631 |
End bp | 2015271 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640581347 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_001262300 |
Protein GI | 148554718 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCAG GACTCACCTT GAACGAGCGT CGATGGGGCG TGGCGATCCT GGCCGTGCTG ATCTGCATCG GGGCCGCCAT GGCTGCGGCG GGCGCCGACC GCGCCGATCC CTTCCAGGTG CACGGCTTCC TGGTGATGGC GTACAGCCTG ATCGTGCTCT GCGTCGTGCT GCGCGGCTAT GACGAGCCGG GGCCGGGCCG GCTGGAGAGC TATTATGACG ACCCGAGCAA GGCGGGGATC GTCATCGCCA TGCTCTGGGC GGTGTTCGGC ATGTTCATCG GCGACTGGGT CGCGTGGCTG CTCGCCTATC CGGACATGAC CTTCGACGCC GCCTGGTCGA GCTTCGGGCG GCTGCGCCCG GCCCATACCA CCGGCGTGAT CTTCGGCTTC GGCGGCAACG CCCTGATCGC CACCTCCTTC CATGTGATGC AGCGGACCTC CCGCGCGCGC CTGCCGGACC AGTTCAGCCC ATGGTTCGTG CTGGTCGGCT ACAACCTGTT CTGCCTGCTG GCGGTGTCCG GCTATTTCCT GGGGATCACC CAGTCGAAGG AATATGCCGA GCCCGAATGG TATGCCGACA TCTGGCTGGT CGTCGTCTGG GTGACCTATC TGCTGCTCTA TCTGCGCACG CTCGCGCGGC GGAAGGAACC GCACATCTAC GTCGCCAACT GGTATTATCT GGCGTTCATC CTGGTGGTAG CGATCCTCCA CATCGTCAAC AACCTCGCGG TGCCGGCCTC GTTCGGCGGC GCCAAGAGCT ATTCGCTGTT CTCGGGCGTC CAGGACGCGA TGACCCAGTG GTGGTACGGG CACAACGCCG TCGCCTTCTT CCTGACCGCC GGCTTCCTGG GCATGATGTA CTATTATCTG CCCAAGCGCG CCGGGCGGCC GATCTACTCC TACCGCATGT CGATCATCGG CTTCTGGGGG ATCACCTTCT TCTACATGTG GGCGGGGTCG CACCACCTCC ACTACACCGC GCTGCCGCAA TGGGTGCAGA CGCTGGGGAT GACCTTCTCG GTCATGCTGC TGGTGCCCTC GTGGATCGCC GCCGCCAACG CGCTGCTGAC GCTCAACGGC GCGTGGGACA AGGTCCGCGA CGACGCGACG TTGCGCTTCA TGATGATGGC CGCGATCTTC TACGGGCTCT CGACCTTCGA GGGATCGTTC ATGGCGATCC GTTCGGTCAA CGCGCTGTCG CACTATACCG ACTGGACGAT CGGGCACGTC CATGCCGGCG CGATGGGCTG GGTCGCGCTG ATCACCTTCG GCTCGATCTA TGCCGTCGTC CCCTGGCTGT GGAAGCGCGA GCGGATGCAT TCGCCGGCGC TGGTCGAGGT CCACTTCTGG CTCGCGCTGG CCGGGACCCT CATCTACGTC TTCGCGATGT GGAACTCGGG CATCATCCAG GGCCTGATGT GGCGCACCTA TAACGACAGC GGGACGCTGA CCTACTCGTT CCTCGACTCC ATGGTCGCGA TGCACCCCTA TTATATCGCC CGCGCGATCG GGGGGCTGCT GTTCCTGATC GGGGCGATCG TCGGCTGCTA CAATATCTGG ATGACGATCC GCCGGCCGGC CGGGGCGCCG GCCCCGTCGG ACGACGCGCC CCTTCCCGCC AACCTCCAGC CTGCGGAATA A
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Protein sequence | MISGLTLNER RWGVAILAVL ICIGAAMAAA GADRADPFQV HGFLVMAYSL IVLCVVLRGY DEPGPGRLES YYDDPSKAGI VIAMLWAVFG MFIGDWVAWL LAYPDMTFDA AWSSFGRLRP AHTTGVIFGF GGNALIATSF HVMQRTSRAR LPDQFSPWFV LVGYNLFCLL AVSGYFLGIT QSKEYAEPEW YADIWLVVVW VTYLLLYLRT LARRKEPHIY VANWYYLAFI LVVAILHIVN NLAVPASFGG AKSYSLFSGV QDAMTQWWYG HNAVAFFLTA GFLGMMYYYL PKRAGRPIYS YRMSIIGFWG ITFFYMWAGS HHLHYTALPQ WVQTLGMTFS VMLLVPSWIA AANALLTLNG AWDKVRDDAT LRFMMMAAIF YGLSTFEGSF MAIRSVNALS HYTDWTIGHV HAGAMGWVAL ITFGSIYAVV PWLWKRERMH SPALVEVHFW LALAGTLIYV FAMWNSGIIQ GLMWRTYNDS GTLTYSFLDS MVAMHPYYIA RAIGGLLFLI GAIVGCYNIW MTIRRPAGAP APSDDAPLPA NLQPAE
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