Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1782 |
Symbol | |
ID | 5200566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1996587 |
End bp | 1997450 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581329 |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_001262282 |
Protein GI | 148554700 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0988363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG ACCACCAGGC CGACCTCACC CTTGCCGTCG AGCTCGCCAT GGCCCGGACG CCGGACCCTC GCCTTCGCGA GGTGATGGCC GCGCTGGTGC GCCACGCCCA CGCCTTCGTC CGCGAGGTGC GGCCGACCGA CGAGGAGTTC GAGCGCGGCA TCGATTTCCT GATCGGCATC GGCCAGGCCA CCGACGAGAA GAAGAACGAG GTGGTGCTCG CCGCCGACGT GCTCGGCATA TCCAGCCTCG TCGGGCTGCT CAACAAGCCG CTCGACGGCG TCCGCACCGC GCCCGCGCTG CTCGGTCCCT TCTGGCGGAG GAACGCGCCC GAATGCGCGC CGGGCGACAG CATCGTCCGC TGCGCGGTGG AAGGGGAACG GCTGCTGGTG CGCGGGTCCG TCCGCGATCC GGCCGGCCGG CCGATCGCCG GGGCCCGCAT CGACGTCTGG CAGGCGTCGC CGGTCGGGCT CTACGAGAAT CAGGACGACG GCCAGCCGGA GATGAACCTT CGCGGCCTGT TCACCGCCGA CGCGGCGGGC GCCTATCATT TCGAGACGGT TCGCCCGGCC GGCTATCCGG TCCCGACCGA CGGTCCGGTC GGCGATCTGC TGCGGGCGCA GCGCCGCCAT CCCTATCGGC CGGCGCACAT CCATTTCATG GTGACGGCGC CGGGCCATGC GACCCTCGTC ACCCAGATCT TCGCCGACGA GCAGGACCGC CTCGAAACCG ACGTGACCTT CGGCGTGCTC GAGCCGCTCG TCGCCCGCTT CGAGCCGAAG GAGGGCGGCA ATCTCCAGGT GCTGCGCTGC GACTTCGTGC TCGAAGCGGG CGAGACGCGC ATTCCCAAGG CGCCGATCCC ATGA
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Protein sequence | MIIDHQADLT LAVELAMART PDPRLREVMA ALVRHAHAFV REVRPTDEEF ERGIDFLIGI GQATDEKKNE VVLAADVLGI SSLVGLLNKP LDGVRTAPAL LGPFWRRNAP ECAPGDSIVR CAVEGERLLV RGSVRDPAGR PIAGARIDVW QASPVGLYEN QDDGQPEMNL RGLFTADAAG AYHFETVRPA GYPVPTDGPV GDLLRAQRRH PYRPAHIHFM VTAPGHATLV TQIFADEQDR LETDVTFGVL EPLVARFEPK EGGNLQVLRC DFVLEAGETR IPKAPIP
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