Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1777 |
Symbol | |
ID | 5200772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1992488 |
End bp | 1993543 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581324 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001262277 |
Protein GI | 148554695 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.142089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCGGT TGACGATGCG CCACTTGCGC ATCGTCCTGG CGATCACCGA CGGGGGAAGC CTGGTCGCGG CGGCGCACAC GCTCTGCATG ACCCAGCCCG CGATCACCAA GGCGCTTCAG GAAACCGAGG CGCTCCTCCA GATCGAGCTG TTCTCGCGCA CCAACCGGGG CGTCGTGCCG ACCCCGGCGG GCCTGGCGCT CGCCGCCCAT GCCCGGCTGA TCACCGCGCA GATCGGCCAT GCGGCGGAGG AGATCCACGA TCTGCGCGAC GGCATGGGCG GGCGGATCGC GGTGGGCACG CTGCTCTCCG CCTCGGCCGA CCTGCTGCCC CGCGCGATCG CGATGCTGCG CCGGGATCGT CCCAAGCTGG TGGTGACGAT CGTCGAGGGG ACCAACGACC GGCTGCTGCC CGACCTGCGG CTCGGCAAGC TCGACATGGT GGTCGGGCGC TTGCCCGAAT ATCACGAGCT GCAGGGCCTG CACCAGGAGG TGCTGCTGAC CGACGTCTCC TGCGTGATCG TCCGGCCCGG CCATCCGCTG GTCGGCCGCG ATCCGCTGCG GCTCGCCGAC CTCGCCGGCT GGGACTGGAT CCTGCCCCGG CTGGAGACCA CGCTCCGACG GCACATCGAC CAGGCGTTCC GCGACGAAGG GGTCGAGCCG CCGCCCCACG CCGTGGAATC GGTGTCGCAG CTCACCAACC GCAGCCTGGT GATGGACGCC GACTATCTCG GCATCCTGCC CTGGCAGCTC GCCCATCGCG AGGCGCGGGC GGGCCATCTC GTCATCTTGC CGTTGCTGCT GCGGCCCACC ATAGGCCCGG TCGGCATTTC GACGCGCGCC GAATGCCGCC TCTCGTCCGC GGCGGAAATG CTGATCGCGG CGATGCGCGA CTTCGCCCGC CAGGCCGAAC CGTCGCCGCT CCTCGCTGGT ATAACCGAGC GCGCGACCGC GGCCGGGCCA AGGCGCCCCG GCCCGGACTC CGTCGCGATG TCCGGCATGC CGGGCGGAGC TGCCCGTGAT CGGGAAGGAT GGCGCCGGGA TTATCAGATG ACCTGA
|
Protein sequence | MSRLTMRHLR IVLAITDGGS LVAAAHTLCM TQPAITKALQ ETEALLQIEL FSRTNRGVVP TPAGLALAAH ARLITAQIGH AAEEIHDLRD GMGGRIAVGT LLSASADLLP RAIAMLRRDR PKLVVTIVEG TNDRLLPDLR LGKLDMVVGR LPEYHELQGL HQEVLLTDVS CVIVRPGHPL VGRDPLRLAD LAGWDWILPR LETTLRRHID QAFRDEGVEP PPHAVESVSQ LTNRSLVMDA DYLGILPWQL AHREARAGHL VILPLLLRPT IGPVGISTRA ECRLSSAAEM LIAAMRDFAR QAEPSPLLAG ITERATAAGP RRPGPDSVAM SGMPGGAARD REGWRRDYQM T
|
| |