| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1774 |
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| Symbol | |
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| ID | 5200769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1983911 |
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| End bp | 1986955 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581321 |
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| Product | amidohydrolase |
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| Protein accession | YP_001262274 |
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| Protein GI | 148554692 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system
[COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0234293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGGA AACCGAACAT CGCCGCGCGG CTGCTCGCCA CGCTGCTGGC CGCGACCTCG
CTGTGCGGCA TCGCCGCGGC CAAGGAGGTC AGCTTCGAGG TCAGCGAGGG GACCAACTTC
GCCGTCGCCG CGGCGCGGGA CGGGCGCTCG CTGGCGATCG ACCTGCAGGG ACGGCTCTGG
GTGCTGCCCG CGACGGGCGG CAAGGCGACG CCGATCACCC CGGTGATGGA CGAGGCGCGC
TATCCGGTCT GGTCGCCGGA TGGCCGCTGG ATCGCCTTCC AATATTATAC CGACGAGAAC
TGGCACATCG CGGTGGTGCG CCCCGACGGC AGCGAGCTGA AGGTCGTCAC CCGGGGCCCC
TATGACGATC GCGAGCCGAG CTGGCGGCCC GACGGCAAGG CGATCCTGTT CAGTTCGGAT
CGCACCCGCA GCCTCGACCT GTGGCAGGTG ACGCTCGACG ACGGCGTCCA GACGTCGGTC
ACCAGCGGCG ACGCGGACGA TTATCACCCG GCGGTGTCGC CCGACGGCGG TCGCACCGCC
TATGTGCAGG GCACCGGCAG GACGACCAGC CTGATCGTCG AGGAAGCGGG CAAGGCGCGG
ACGCTGGTCA GCGGGAAGCT GTCGATCAGC CGGCTGCACT GGAGCCCCGA CGGCAGCCGG
ATCTCGGCGA TCCTGTTCGA CTATGAGCGC GGCGATGCGC GCGTCGCCCT GTTCGACGCG
GCCAGCGGCA AGGAGGTCGC CAGCCACAGC CGGCCCGGCG AGGACATCTT CCCGACCGGC
GCCTCCTGGC TCGACGCGCG GCACCTCGTC TATGGCGCCG ACGGCGGCAT CCGGGTCTGG
ACGCCGCAGG GGGACACGGT CGCCAAGCGG CCCTTCACCG CCGCCTTCAC CGTCCAGGAC
GCGCCCGTCT ATCGCAAGCG CGAGATCGAC CTGACCTCGA CCGGGGACAG GCCGGTGCTC
GGCATATTGC GGCCGACCAC GTCGCCCGAC GGCCGCCACG TCGCCTTCAC GGCGATGGGC
AATCTCTGGA TGCTGACGGT CGGCGACCCC AAGCCCGTCC AGCTCACCCA CGACCATTTC
CTCGACGTCG ATCCGACCTG GTCGCGCGAC GGCCAATGGC TCGCCTATGT CTCCGATCGC
CGGGGGACGG GGACGATGGA CCTCTACCTG CGCAACGTCG CGACCGGCGC CGAACGGCGG
CTGACCCAGA CCGAAGAGGA TCTGATGCAG CCGAGCTTCT CGCCGGACGG CAAGAGCGTC
GCGGTCTTCA TGCGCAATTC GGCCGACTGG CACGGCGCGA CCCTCTATCT GGTCGACGTC
GCGACCGGGG CGATGAAGAA GGCGCACGAC GCGCTGTTCC TGCCGTCGGT GCCGTCATGG
TCGGCCGACG GGCGCAAGAT ATCGGTGCTG GCGCTGCGGG TCTATTCGAA CCGCTTCCGC
AAGGGCGACA ACGCCTTCTT CACGATCGAC CTGGACAGCG GCAAGGGCCA TTTCACCAGC
CCGGTCGCCG ACCGCTCGAT CTCGTCGCGC AGTCAGTTCG GGCCGGTCTG GTCGCCCGAC
GGCACCCGCA TGGCCTATAT CCATGAAGGA CTGCTGTGGA GCGCCGCGGT CGACGCCGAT
GCGAACATCA TCGAGCCGCC GGTCCAGCTC AGCCGCGACT ATGCTTCCTA TCCGAGCTGG
AGCGGGGATT CGCGGTCGCT GACCTATCTG GCGGGGCGGA AGCTCCAGCG GGTCCGCCTC
GACGACGGCG AGGTCGAGAC CATCCCGATC GAGCTGAGCT GGCGGCGTCC GGCCAATCCC
GGCACGACGG TGATCCAGGC CGGCCGGGTC TTCACCGGCG TGTCGGACCG CTATCTGCGC
GACGTCGACA TCGTCGTCGA GGACAATGTC ATCAAGCAGA TCGTCCCGCG CCGGGCCGAA
TGGCCGGGGG CGAAGCTGAT CGACGCGCGG ACCAAGGCGA TCGTGCCGGG CCTGTTCCAG
ACCCACATCC ACCAGTTCGT CAGCGACGGC AGCAAGGTCG ACAAGGTCTG GCTGTCGTTC
GGCATCACCT CGCTGCGCGA GCCGGGGGCC GAGCCCTATG AGGCGCTCGA ACGGCGCGAG
GCGTGGATGA GCGGCCAGCG GGTCGGGCCG CGCCAATTCT ACGCCAACCT GATCGAGGGG
CGGCGGCTGT TCTACTGGAT GAACACGGCG ACGGTCGCCG ATGCCCAGCT CGAACTCGAA
CTGCAGCGCG CGATCGACCT CGATTTCGAT TTCATCAAGA CCTACGAGAC GATGGACCAT
GAGGTGCAGA AGCGGGTGGT CGACTTCGCC CATGCCCATG GCCTGCCGGT CGCCTCGCAC
GAGCTCTATC CGGCCGTGAC TTTCGGGGTC GACGCGGTCG AGCATCTCGG TACCCGGGAC
CGGATGGAGT TTTCCGACCG GCTGACGATG AACCGGACGT CCTATGACGA CGTCATCCAG
CTCCTCGCCC GTTCCGGCAT GGCGATCAGC CCGACCAGCG CGGGGCGCGC GCCGGAGGCG
ACGCATCTGG CCGAGATGGA CCGCCACCCC GAGATCCTCG ACCTTCCCCA GATCAAGGCC
TATGCGCCGC GCTACAAGCG CGCCCATGCG AGCCTCATGA CCTATATGCG CGGCGTCTAC
GGCGACAGCG CATCGCGGCT GGAGACCAAC GAACTGGGCC TGCTCGGGCG GATGAAGCGC
GCCGGCGTGC TGATCGGTTC GGGCACCGAC GGCGGCACGT TGCAGGACGG CTATTCGGTG
ATCCTCGAGC TGATCCATTT CGCCGAGGCG TTCGGCCCCT ATCAGGCGCT CCGCTCGGGC
ACGATCGACT CCGCGAAGAT CACCGGCGTC GACAAATATC TCGGCAGCAT CGAGCCCGGC
AAGCTCGCCG ACATGGTGAT CGTCGACGGC GATCCGCTCA AGAACGTCGC CGATCTCTAC
AAGGTCGACA CCGTGATCAA GGATGGCCGC GCCTATCCGC TGGCGGAGCT GCTCGGCCAT
TATGATCGCG ACGATACGGC GAGGATGATC CCCAGCCCGG AGTGA
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| Protein sequence | MMRKPNIAAR LLATLLAATS LCGIAAAKEV SFEVSEGTNF AVAAARDGRS LAIDLQGRLW
VLPATGGKAT PITPVMDEAR YPVWSPDGRW IAFQYYTDEN WHIAVVRPDG SELKVVTRGP
YDDREPSWRP DGKAILFSSD RTRSLDLWQV TLDDGVQTSV TSGDADDYHP AVSPDGGRTA
YVQGTGRTTS LIVEEAGKAR TLVSGKLSIS RLHWSPDGSR ISAILFDYER GDARVALFDA
ASGKEVASHS RPGEDIFPTG ASWLDARHLV YGADGGIRVW TPQGDTVAKR PFTAAFTVQD
APVYRKREID LTSTGDRPVL GILRPTTSPD GRHVAFTAMG NLWMLTVGDP KPVQLTHDHF
LDVDPTWSRD GQWLAYVSDR RGTGTMDLYL RNVATGAERR LTQTEEDLMQ PSFSPDGKSV
AVFMRNSADW HGATLYLVDV ATGAMKKAHD ALFLPSVPSW SADGRKISVL ALRVYSNRFR
KGDNAFFTID LDSGKGHFTS PVADRSISSR SQFGPVWSPD GTRMAYIHEG LLWSAAVDAD
ANIIEPPVQL SRDYASYPSW SGDSRSLTYL AGRKLQRVRL DDGEVETIPI ELSWRRPANP
GTTVIQAGRV FTGVSDRYLR DVDIVVEDNV IKQIVPRRAE WPGAKLIDAR TKAIVPGLFQ
THIHQFVSDG SKVDKVWLSF GITSLREPGA EPYEALERRE AWMSGQRVGP RQFYANLIEG
RRLFYWMNTA TVADAQLELE LQRAIDLDFD FIKTYETMDH EVQKRVVDFA HAHGLPVASH
ELYPAVTFGV DAVEHLGTRD RMEFSDRLTM NRTSYDDVIQ LLARSGMAIS PTSAGRAPEA
THLAEMDRHP EILDLPQIKA YAPRYKRAHA SLMTYMRGVY GDSASRLETN ELGLLGRMKR
AGVLIGSGTD GGTLQDGYSV ILELIHFAEA FGPYQALRSG TIDSAKITGV DKYLGSIEPG
KLADMVIVDG DPLKNVADLY KVDTVIKDGR AYPLAELLGH YDRDDTARMI PSPE
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