Gene Swit_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1754 
Symbol 
ID5200188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1963269 
End bp1964102 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID640581301 
Productalpha/beta hydrolase fold 
Protein accessionYP_001262254 
Protein GI148554672 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG GTTTGGAAAA GCGCACGGTT CAGGTCAACG GCACGCCGAT GGCCTATGTC 
GAGCAGGGCG AGGGCGAGCC GCTGATCGCC ATCCATGGCG GCGGGCCCGG CGCCTCGGGG
ATCAGCAACT ACCGCCGCAA CATCGCCCCG CTCGCCGTCG GCGGGCGGCG CGTCATCGTC
CCCGACCTGC CCGGCTATGG CGACTCTCCG TCGCAGCCGA CCGCCGATGC GATCTATGAG
GGCTTCGCCG ACAACATCCT CGGCCTGATG GACGCGCTGG GGATCGAGAA GGCCAGCTTC
ATCGGCAATT CGCTGGGCGG CGGCACGACG CTCAGCCTGG CGCTGCGCCA TCCCCATCGC
GTCAACCGGA TGGTCCTGAT GGGCCCGGGC GGCGGCTATT CGCTGAGCCC CCATCCGACC
GAGGGGCTGC TGCGCATGGT CCATTTCTAC GAAGGCGAGG GGCCGACCCG CGAGAAGCTC
GACAAGGTGC TCGACCTGCT GGTGTTCGAC CGGTCGATGA TCACGCCCGA TCTGGTCGAG
GAACGCTACA AGGCCTGCGT CCGTCCCGAC ACCATGGCCA ACCCGCCGCT GCGCGGCCGG
GGCGCCAACC CCAAGGACGA CCTGTGGCGG CAGCCGCTCA ACGAGCTGCA GCACCGCACG
CTGATCATCT GGGGGCGCGA GGACCGGGTG CTGTCGTTCG ACAATGCGCT GGTGTTCCTG
AAGTCGATCC CCAATGCCGA GCTGCACGTC TTCCCGAAGA CCGGCCACTG GGTGCAGTGG
GAGCGCGCCG ACCAGTTCAA CGACATGGTC AACGACTTCC TCGACAGGGC ATGA
 
Protein sequence
MTDGLEKRTV QVNGTPMAYV EQGEGEPLIA IHGGGPGASG ISNYRRNIAP LAVGGRRVIV 
PDLPGYGDSP SQPTADAIYE GFADNILGLM DALGIEKASF IGNSLGGGTT LSLALRHPHR
VNRMVLMGPG GGYSLSPHPT EGLLRMVHFY EGEGPTREKL DKVLDLLVFD RSMITPDLVE
ERYKACVRPD TMANPPLRGR GANPKDDLWR QPLNELQHRT LIIWGREDRV LSFDNALVFL
KSIPNAELHV FPKTGHWVQW ERADQFNDMV NDFLDRA