Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1718 |
Symbol | |
ID | 5197956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1918840 |
End bp | 1920510 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640581266 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_001262219 |
Protein GI | 148554637 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG ATCCCTACAC GCTCGAGATC ATCAAGAACG CGCTCGTCTC GATCGGCGAC GAGATGTTCC AGACGATGGC GCGGACCAGC ATGAGCCCGA TCATCTACGA GGCGCTCGAC TTCTCGGTCG GCATCACCGA CGCGCGCGGC GAGCTGATCG CGCAGGGGCA GGGCACCACC GTCCTGCTCG CGATGATCGA CAGCTTCGTC CACGACATCC TCGCCAAGTT CGGCGATGCG ATCCGGCAGG GCGACGTGTT CATCGGCAAC GATCCCTATC GCGGCGGCGG CACCCATCTC TCCGACTTCG GCATCGCCAC GCCGATCTTC CATGACGAGC GGCTGGTCGC CTTCGCGGTC AACAAGGCGC ACTGGCTCGA CGTCGGCGGC GCGGTGCCGG GCAGCTTCTC GACCAACGCC ACCGAGATCT TCCAGGAAGG CATCCAGATG CCGATCTGCA AGATCGTCGA GGGCGGCACC CTGCGGCAGG ACATCCTCGA TATCATCGTC GCCAATATCC GCGTGCCGCA GGAAAGCGTC GGCGACATGT GGGCCGGGGT CGCCGCGAAC GGGGTCGCCG AGCGCCGCCT GCGCGAACTG TTCGACAAAT ATGGCCATGA CGCCGTGCTG CGGGCCAAGG ACGAACTGCT CGATTATGGC GAGGCGATGG TCAAGCACGA GCTGGCGGCG CTGCCCAAGG GCGTCTTCCA TGCCGAGGAC CTGATCGACG ACGACGGCCG CAGCGACGAG CCGCTCAAGG TGATGGTCAA GATCACCATC ACCGACGACA AATTCGTGGC GGACTTCACC GGCAGCGCGC CGCAGACGAT GGGCCCGATC AACAATTCGC GCACCGGCCT CACCTCGGCG GTGCGCCTGA TCTTCAAGGC GATCACCAAT CCGCAGGTGC CGGCGAACAG CGGCTCCTTC CGCCCGATCG AGATCATCTG CCCCGACCGC ACCGTCTTCA CCGCCGAGCG GCCGGCGCCG GTCTCCACCT ATTGGGAGAC GCTGATGTAC GGCGTCGACC TGATCTGGCG CGCGCTCGCC CCGCACCTGC CCGACCGGCT GGGCGCCGGC CATATGCTGT CGGTCTGCTC GGTGGTGTTC GCCGGCAGCC ATGCCGATAC CGGCAAGAGC ACGATCCTCG TCCAGCCGCT GGTCGGCGGC TGGGGCGGCC ATCAGGGCAA GGACGGCGAG TCCGGCCAGT TCGCCGCCGC CGACGGCGAG ACCTACAATG TGCCGATCGA GATCACCGAG GCGCGCTACG GCGTCCATGT CGACCAATAT GCCTTTCACG ACGAGGATGG CGGCCATGGC GAGCATCGCG GCGGCAAGGG CGTCGTCCTC GACTATCGGA TGCGCACCGA CGATTTCGTC GTCACCGGCA GCTTCGGCCG CTTCAAATAT CCGCCCTGGG GCATGGCGGG CGGCGGCGAG GGATCGCCCA ACCATTTCGA CATCATCCGC GCCGACGGCA CGCACGAGGT CCATGGCAAG GTCACCGGCG CCAAGGTGGC CAAGGGCGAC GTCGTCCGGA TGGTGACCGC GACCGGCGGC GGCTGGGGTG ATCCGGCGCG ACGCAGCAAG ACGGCGCTCA GGGAGGATTT GCGCAACGGT TTCCTGACCG CCGACCAGAT CGATCGCCAT TATGGCGGGA TCGACGGCTG A
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Protein sequence | MKTDPYTLEI IKNALVSIGD EMFQTMARTS MSPIIYEALD FSVGITDARG ELIAQGQGTT VLLAMIDSFV HDILAKFGDA IRQGDVFIGN DPYRGGGTHL SDFGIATPIF HDERLVAFAV NKAHWLDVGG AVPGSFSTNA TEIFQEGIQM PICKIVEGGT LRQDILDIIV ANIRVPQESV GDMWAGVAAN GVAERRLREL FDKYGHDAVL RAKDELLDYG EAMVKHELAA LPKGVFHAED LIDDDGRSDE PLKVMVKITI TDDKFVADFT GSAPQTMGPI NNSRTGLTSA VRLIFKAITN PQVPANSGSF RPIEIICPDR TVFTAERPAP VSTYWETLMY GVDLIWRALA PHLPDRLGAG HMLSVCSVVF AGSHADTGKS TILVQPLVGG WGGHQGKDGE SGQFAAADGE TYNVPIEITE ARYGVHVDQY AFHDEDGGHG EHRGGKGVVL DYRMRTDDFV VTGSFGRFKY PPWGMAGGGE GSPNHFDIIR ADGTHEVHGK VTGAKVAKGD VVRMVTATGG GWGDPARRSK TALREDLRNG FLTADQIDRH YGGIDG
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