| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1717 |
|---|
| Symbol | |
|---|
| ID | 5197990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1917600 |
|---|
| End bp | 1918823 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581265 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001262218 |
|---|
| Protein GI | 148554636 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA TAGTGGCGAA CTGCACCCTG TTCGACGGCG TGTCGGGCGA CATGCTGCCC
GGCCGGTCGC TGCTGATCCG CGACGGCCGG ATCGCCGAGA TCCACGATCG CCCGATCGCG
AGCGCGGCGG CGACGGTCGT CGACGTCGCC GGCCGCACCG TGATGCCGGG GCTGATCGAC
GCGCATTTCC ACGCCTATGC CGCCGAGGTG AACCTCGCTA CGCTCGATCG CACCCGTCCC
GAGCTGCGCG CGCTCTATGC CCGCAAGGCG CTGGAGGATG CGCTGCAGCG CGGCTTCACC
ACGGTGCGCG ACGCGGCCGG CGGCGATCTC TCGCTGGCGG TCGCGATCGA GCGCGGGCTG
ATCAGGGGGC CGCGCTTCTT CTATTCGGGC CTCGCGCTCA GCCAGACCGG CGGCCATGGC
GACATGCGCG GCACCGGGCC GGACTGCGGC TGCGGCTATT GCGGGTCGCT GACGATCCTC
GCCGACGGCG TCGACGAGGT CCGCAAGGCG GCGCGCGAGC AGCTCCGGCT CGGCGCGACC
CAGATCAAGC TGTTCCTGTC GGGCGGCGTC GCCTCCCCCT CCGATCCCTA TTGGATGGCG
CAATATTGCG ACGACGAGCT GCGGGCGGCG GTCCATGAGG CGGCGACGCG GCGCACCTAT
GTGATGGCGC ATGCCCATAC CGCCGAGGCG GCGATGCGCT GCATCCGCAA CGGCGTCCGA
TCGATCGAGC ATGCGACGAT CCTTGATCGC GCGACGGCGG AGGCGGTGGC CGCGGCCGAG
GATGTCTATG CCGTCCCGAC CCTGGTCACC TTCCGCAAGC TGATCGACGA AGGCGCGGCG
CTCGGCCTGA CCCCGGTCAG CCTCGCCAAG ACGGTCGAGG TCGAGAAGCA TGCGCTCCGG
TCGCTCGACC TGTTGCATGG CGCCGGCGCC CGGATCGGCT TCGGCACCGA TCTGCTCGGG
CCGCTGATGG CCAGCCAGGC CGAGGAGTTC GCGCTGCGCC GCCAGGTGCA GCCGGCGATC
GACATCCTGC GGTCGGCGAC CTCGGTCAAT GCCGCCCTGC TCAACCAGGC CGGCGAGCTG
GGGGCGATCC GTCCGGGCTA TTGCGCCGAC CTGCTGGTCG TCGACGGCAA CCCGCTCGAC
GACGTCGCCG TGCTGGCGCG GCCCGAACGG ATCATGCTCG TGATGAAGGG CGGCGTGGTC
CACAAGAACA TCCTGCCGGC GTGA
|
|---|
| Protein sequence | MTTIVANCTL FDGVSGDMLP GRSLLIRDGR IAEIHDRPIA SAAATVVDVA GRTVMPGLID
AHFHAYAAEV NLATLDRTRP ELRALYARKA LEDALQRGFT TVRDAAGGDL SLAVAIERGL
IRGPRFFYSG LALSQTGGHG DMRGTGPDCG CGYCGSLTIL ADGVDEVRKA AREQLRLGAT
QIKLFLSGGV ASPSDPYWMA QYCDDELRAA VHEAATRRTY VMAHAHTAEA AMRCIRNGVR
SIEHATILDR ATAEAVAAAE DVYAVPTLVT FRKLIDEGAA LGLTPVSLAK TVEVEKHALR
SLDLLHGAGA RIGFGTDLLG PLMASQAEEF ALRRQVQPAI DILRSATSVN AALLNQAGEL
GAIRPGYCAD LLVVDGNPLD DVAVLARPER IMLVMKGGVV HKNILPA
|
|---|
| |