| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1623 |
|---|
| Symbol | |
|---|
| ID | 5196469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1805162 |
|---|
| End bp | 1806619 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640581171 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_001262124 |
|---|
| Protein GI | 148554542 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCAC CGAGCGAGAA GCTGCTGTTG TTTGGTGCGA CGGGAGACCT GTCGCAGCGG
ATGCTGCTGC CGTCGCTGTA CGGGCTGGCG GCGGATGGGT TGCTGCCGTC GGGTCTGGCG
ATCGTGGGGA CGGCGCGCAG CGGGCATGAC GACGCGGCGT TCCGGGGGTT CGTCGAGCAG
GCGCTGCGCC GCTTCGTGCC GGCCGAGCGG CTCGACGAGG CGGCGCTGGG CGGCTTCCTC
GCGCGGGTCG GCTATGTCCC GGTCGACGCC TCGAAGGAGG GCGACTTCGC CGCGCTGGCG
GAGAAGGTCG GGTCGACGGA GCGGGGGCTG TCGATCTTCC TGTCGACCGC GCCGTCGCTG
TTCGGGGCGA CGATCGACGG TCTCGCCAAG GCGGGGCTGG CGGGCGAGGG GGTGCGGATC
GGGCTGGAGA AGCCGCTCGG CTACGACATG GCGTCGAGCC GCGAGATCAA CGACGCGGTC
GGATCGGTCT TCCCCGAGGA GCGGATCTTC CGGATCGACC ATTATCTGGG CAAGGAGACG
GTCCAGAACC TGCTGGCGCT GCGCTTCGCC AACGGGCTGT TCGAGCCGCT GTGGCGCGAG
GGCGGGATCG ACCATGTCCA GATCACCGTG TCGGAGACGG TCGGGCTGGA GGGGCGGGTC
GGCTTCTACG ACGGGGCGGG GGCGCTCCGG GACATGGTGC AGAACCACAT GCTCCAGCTG
CTGGCGCTGG TGGCGATGGA GCCGCCGGCG CGGTTCGACG CGGCGGCGGT GCGCGACGAG
AAGGTGAAGG TGTTCCGCTC GCTGCGCCCG ATCGACCGGG CGACGGCGGC GAGCCACAGC
GTGATCGGGC AATATGGTGC CGGCGCGGTC GCGGGCGGGC CGGTGCCGGG CTATGTCGAC
GAGCTGGGCA AGCCGTCGGA CACCGAGACC TTCGTCGCGC TGAAGGCGAA CATCGACAAT
TGGCGGTGGA AGGGGGTTCC CTTCTACCTG CGCACGGGCA AGCGGCTGCC GAGCCGTCAG
TCGGAGATCT TCATCCAGTT CAAGGGGGTG CCGCACTCGA TCTTCGACGG GCGGGGCGCG
GTGCTGCAAC CCAACAAGCT GATCATCCGT TTGCAGCCCG ACGAGAATGT CCGGCTGCTG
CTGATGGCGA AGGAGCCGGG GCTCGACCGC GACGGGATCA GGCTGAGGGA GGTGCCGCTC
GACATATCGA TGCCGAACGC CTTCGCCGAC AGCCGGCGGC GGATCGCCTA TGAGCGGCTG
CTGCTCGACC TGGTCGAGGG CGACCAGACG CTGTTCGTGC GGCGCGACGA GGTCGAGGCG
CAATGGGAAT GGGTCGACGC GATCCGCGAC GGCTGGGCCG CCAATGCCAT GAAGCCCAAG
CCCTATATGG CCGGTACATG GGGCCCCTCC GCCGCCATCG CCCTCACCGA ACGCGACCGC
GTCACGTGGC ATGATTGA
|
|---|
| Protein sequence | MTSPSEKLLL FGATGDLSQR MLLPSLYGLA ADGLLPSGLA IVGTARSGHD DAAFRGFVEQ
ALRRFVPAER LDEAALGGFL ARVGYVPVDA SKEGDFAALA EKVGSTERGL SIFLSTAPSL
FGATIDGLAK AGLAGEGVRI GLEKPLGYDM ASSREINDAV GSVFPEERIF RIDHYLGKET
VQNLLALRFA NGLFEPLWRE GGIDHVQITV SETVGLEGRV GFYDGAGALR DMVQNHMLQL
LALVAMEPPA RFDAAAVRDE KVKVFRSLRP IDRATAASHS VIGQYGAGAV AGGPVPGYVD
ELGKPSDTET FVALKANIDN WRWKGVPFYL RTGKRLPSRQ SEIFIQFKGV PHSIFDGRGA
VLQPNKLIIR LQPDENVRLL LMAKEPGLDR DGIRLREVPL DISMPNAFAD SRRRIAYERL
LLDLVEGDQT LFVRRDEVEA QWEWVDAIRD GWAANAMKPK PYMAGTWGPS AAIALTERDR
VTWHD
|
|---|
| |