| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1570 |
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| Symbol | |
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| ID | 5197583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1746631 |
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| End bp | 1747377 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581118 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262071 |
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| Protein GI | 148554489 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAAT TGCACGGGAA GGTCGCGGCC GTGATCGGCG GGAGCAGCGG GATCGGCGCC
GCCACCGTCA AGATGCTCGC GGACTGCGGC GCGCAGGTGG CCATCGGCTT CCACAGCGGA
GAAGATCGCG CGAAGCAGCT CCAGGCCGGC CTGAAGGGAG GCGGTCACAG CGTTTTCCGG
ATTGCCGTCG ACAACACCCA ATCGGTTCGC GACGCCGCGC GCGCCGTCAT CGACACGCAT
GGCCGGGTCG ACGTGCTGGT CAACTCCGCG GGCACGACCC GCCCCATCCC CCATGCCGAT
CTGGAGGCGC TTGACGACGC CCTGCTCGAT CAGATCATGG CCAGCAATGT GCAAGGACCG
TTCGGAACGA TACGCGCCTT CGCTCCGGCG TTGAAAGCCA GCGGCGACGG CGTGATCGTG
AACGTATCGT CGATCTCCGG CTTCACCGGG AGCGGCAGCA ATGTGGGCTA TTGCGCGTCG
AAGGCCGCGC TGGACACGAT GACGCTTTCG CTGGCCCGCG CGCTGGGCCC CGAGATCCGC
GTGCTCTGCG TCTCGCCGGG AGCCGTGGCG ACGGAGTTCG TCGCCGGCAG GAGCCGGGAA
GCGCTGGAGA AGATCGCCCA GGCGACGCCG CTCAAGCGCG TGGTCGAGCC GGAGGACGTC
GCGCGCACGA TCATGGCCTG CATAACCCAT CTGCGGCTGA CCACCGGCGC CAGGATCGTC
TGCGATGGGG GCCGTTTCCT GGTCTAG
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| Protein sequence | MSELHGKVAA VIGGSSGIGA ATVKMLADCG AQVAIGFHSG EDRAKQLQAG LKGGGHSVFR
IAVDNTQSVR DAARAVIDTH GRVDVLVNSA GTTRPIPHAD LEALDDALLD QIMASNVQGP
FGTIRAFAPA LKASGDGVIV NVSSISGFTG SGSNVGYCAS KAALDTMTLS LARALGPEIR
VLCVSPGAVA TEFVAGRSRE ALEKIAQATP LKRVVEPEDV ARTIMACITH LRLTTGARIV
CDGGRFLV
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