| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1560 |
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| Symbol | |
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| ID | 5198536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1735163 |
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| End bp | 1735654 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640581108 |
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| Product | MarR family transcriptional regulator |
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| Protein accession | YP_001262061 |
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| Protein GI | 148554479 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.853327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.443205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACCC ATCCCATGCA ACCTGCTGAC AAACCTCCTA TTTTTTCGAT GTCGATCGCC
GGGACGCTGC TGGCCGCACG CGAAGCGGTG ATGGCGGATC TGCGCCCTCA CCTGAAGAAG
AACGACTTCA CCGAGGCGCA GTGGCGCGTG CTCAGGGCGG TGGCCGAAGG AAATTGCAAC
GACCAGCGGT CGGTAGCCCG GGCCGCGCTG CTTCATCCAC CAAGCGTCAC TCGGATCCTG
AAGGAACTTG CCCAACGAGG GCTGGTCGAA CGGGGCGCCA ACGAGACCGA CGGCCGCCGA
CAGATCATCG TCGCGACGGC GCGCGCGCGC GAGATCCTGG ATGAGGCGAC CGAGACCAAC
CGGGAGATCG TGCGGCGCTA CCGGGCGACC TTCGGCGCGG AGCGCTTCGA CCGGATGGTG
AGCGAATTGC GCGATTTCAC TGCCACCGTG CGCAGCCTCG GCGCCGACCG GCAGGACGAC
GATATCGCCT GA
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| Protein sequence | MKTHPMQPAD KPPIFSMSIA GTLLAAREAV MADLRPHLKK NDFTEAQWRV LRAVAEGNCN
DQRSVARAAL LHPPSVTRIL KELAQRGLVE RGANETDGRR QIIVATARAR EILDEATETN
REIVRRYRAT FGAERFDRMV SELRDFTATV RSLGADRQDD DIA
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