Gene Swit_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1411 
Symbol 
ID5197675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1551925 
End bp1552362 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID640580957 
Producthypothetical protein 
Protein accessionYP_001261913 
Protein GI148554331 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.506922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.16936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACC GGCTTGAAGG ATGCGCGATG ACGCCCGCCG ATCTCACCCG ACGTTTCGAG 
GCGGCGTGGA ACGCGCACGA CATGGACGCG TTCGGCCGGC TGTTCCACGC CGATGCGACC
TTCGTGAACC GCTTCGGCAC CTATTGGCGC GGCGTCGAGC AGATCGTCGC CGGCCATGCG
GGCATCCACG CGTCGGTCTA CAGCGATTCG ACCCTGGAGA TCGACGCGCC CGACGTCGAT
CCGATCTCGG ACGACGCGGC GATCCTGCAT TTCTGGTCGC GCCTCAACGC CGGCGCCGCC
CATCCGGCGG GGCCGCACCC TGTCGACACG CTGATCATGG CGGTGGCCAC CCGCCGCGCC
GGCGAATGGC GGTTCCAGGC GTTGGAGAAT GTGACCTTGG TCGATCCGCG CACCGGTGAG
CTGGTGCTGC GCCGCTGA
 
Protein sequence
MGNRLEGCAM TPADLTRRFE AAWNAHDMDA FGRLFHADAT FVNRFGTYWR GVEQIVAGHA 
GIHASVYSDS TLEIDAPDVD PISDDAAILH FWSRLNAGAA HPAGPHPVDT LIMAVATRRA
GEWRFQALEN VTLVDPRTGE LVLRR