Gene Swit_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1373 
Symbol 
ID5200675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1516904 
End bp1517326 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID640580919 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001261875 
Protein GI148554293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.150956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA TCCCCGTCAC CCGCTCGATC GCGATCGACA GCGACGAGAT CGAGGAAAGC 
TTCACCCGCG CGGGCGGCCC CGGCGGCCAG GGGGTCAACA CCACCGACTC CGCCGTGATG
CTGCGCTTCG ACGTACGCAA TTCGCCCAAC CTGCCCGACG CCGTGAAGAT CCGGCTGGAC
GCGATCGCCG GCAGCCGAAT GACCCGCGAG GGCGTGCTCG TCCTGCGCAG CGAAGGCGCC
CGATCGCAGC TCCTCAACCG GCAAGAAGTC CGCGAACGGC TGTTCGATCT GATCCGCGAA
GCGACCTTCG TGCCCAAGAA GCGCAAGCCC ACAAAGCCGT CCCGGGCGGC GAAAGCCAAG
CGCATGGACG GCAAGTCCAA GCGCTCGGCG GTCAAGAACC TGCGCGGCAA GGTTTTCGAC
TAG
 
Protein sequence
MPLIPVTRSI AIDSDEIEES FTRAGGPGGQ GVNTTDSAVM LRFDVRNSPN LPDAVKIRLD 
AIAGSRMTRE GVLVLRSEGA RSQLLNRQEV RERLFDLIRE ATFVPKKRKP TKPSRAAKAK
RMDGKSKRSA VKNLRGKVFD