Gene Swit_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1368 
Symbol 
ID5200701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1514578 
End bp1515033 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content72% 
IMG OID640580915 
ProductUspA domain-containing protein 
Protein accessionYP_001261871 
Protein GI148554289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.131997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.256671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTACCT ATATGGTTGT CATCGACGAC AATGAGGCCG CGCGCGCCGC CCTGCGCTTC 
GCCGCCCGGC GCGCCATCAA GACCGGCGGG TCGGTCGAGA TCCTGGCGCT GGTGCCGCAG
CAGGAGTTCG TCCAGTGGGG GGCGGTCCAG GCCACCTTCG AGGAGGAGGC CCGGCTGCGC
GCCGAAGCGA TGGTCGCCCA GGCGGCGAGC GCGCTGATCG AGGATACCGG CGTCATGCCG
TCGATCACGG TGCGCCAGGG CGATCCCGTC GCGGTGGTCC GCGAATTGCT GGCCGAACAG
CCGCACGTCG CGGCCCTGGT CCTGGGCGCG GCGGCGAGCG GCAATCCCGG CAAGCTGGTC
AGCCACTTCG CCGGCACCGA CGCGGGCCAG CTCCCCTGCC CGCTGATGAT CGTCCCCGGC
TCGCTCGACG ACGAGGCGAT CGACCGGCTG AGCTGA
 
Protein sequence
MRTYMVVIDD NEAARAALRF AARRAIKTGG SVEILALVPQ QEFVQWGAVQ ATFEEEARLR 
AEAMVAQAAS ALIEDTGVMP SITVRQGDPV AVVRELLAEQ PHVAALVLGA AASGNPGKLV
SHFAGTDAGQ LPCPLMIVPG SLDDEAIDRL S