| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1353 |
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| Symbol | rplC |
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| ID | 5200526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1500318 |
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| End bp | 1501271 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580900 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001261856 |
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| Protein GI | 148554274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.685053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.045909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGAAG ATAGGGATAC CGACCGGCCT GATCCTCGGA GAGGTGCCGG TGACTGGTCC
CCGCCTTTCG CAGCAATGCG AAATCCATGC CCAGGCGGGG GCTATCGAAA ATTGGGCTGG
AGGCTTCGGT TCATACCGGA GCTTTTTTCG TTGGCACGCT CGCCGCTAAC GCGAGCCTCT
GTTGGGAAGG AACGGATCAT GCGCACTGGC GTGATCGCGA AGAAGATGGG GATGACCCGC
TTGTTCCAGG AAGATGGTCG GCACGTGCCG GTCACCGTCC TGGCACTGGA GAATGTACAG
GTCGTGGCTC GCCGCGAGCA GGACCGCGAC GGTTATGTCG CCGTCCAGCT CGGCGCCGGT
TCGGCCAAGC CGAAGAATCT CACCAAGCCG GAGCGCGGCC ATTTCGGCAA GGCCGAAGTG
GAGCCGAAGG CTTTCGTCGC CGAGTTCCGC GTGTCGGAAG ACGGCCTGCT CGACGTGGGC
GCGGAAATCT CCGCCGACCA TTATGTCGCG GGCCAGTTCG TCGACATCCA GGGCAGCACC
CAGGGCAAGG GCTTCGCGGG CGGCATGAAG CGTTGGGGCT TCGGCGGTCT GCGCGCCACC
CACGGCGTCT CGGTCTCGCA CCGCTCGCTC GGTTCGACCG GTCAGCGCCA GGATCCGGGC
AAGGTCTTCA AGAACAAGAA GATGGCCGGT CACATGGGTG ACAAGAACCG CACCCAGCAG
AACCTCGAGA TCGTCCAGAC CGACGCCGAG CGTGGCCTTC TGTTCGTCAA GGGCTCGGTT
CCGGGCTCGA AGGGCGGCTG GCTGCTGGTC AAGGACTCGG TCAAGATCGC CGCTCCCAAG
GACGCGCCGT TCCCGGCCGG CCTGAAGTCG GCGGCCAACA GCAACAGCGC GCCTACCGAG
ACGCCCGCGG AGGAAGTCGC GGCTCCCGAG GCCACCGAAG GCCAGGAGGG CTGA
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| Protein sequence | MAEDRDTDRP DPRRGAGDWS PPFAAMRNPC PGGGYRKLGW RLRFIPELFS LARSPLTRAS
VGKERIMRTG VIAKKMGMTR LFQEDGRHVP VTVLALENVQ VVARREQDRD GYVAVQLGAG
SAKPKNLTKP ERGHFGKAEV EPKAFVAEFR VSEDGLLDVG AEISADHYVA GQFVDIQGST
QGKGFAGGMK RWGFGGLRAT HGVSVSHRSL GSTGQRQDPG KVFKNKKMAG HMGDKNRTQQ
NLEIVQTDAE RGLLFVKGSV PGSKGGWLLV KDSVKIAAPK DAPFPAGLKS AANSNSAPTE
TPAEEVAAPE ATEGQEG
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