| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1330 |
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| Symbol | |
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| ID | 5200698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1487746 |
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| End bp | 1489107 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580877 |
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| Product | glutamate dehydrogenase |
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| Protein accession | YP_001261833 |
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| Protein GI | 148554251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.40508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTT CCGATCATGT CGACCTCGCG AGTTTCGTCG AGGGGGTGAA GAAGCGTAAT
CCCGGTCAGC CGGAGTTCGT CCAGGCCGTC ACCGAGGTCG CGGAGGACAT CTTCGATTTC
ATCGCCGACA AGGAAGAATA TCATAAGTAC CAGATCCTCC GCCGCATCGC GGAGCCGGAT
CGGGTGATCA GCTTCCGCGT CTGCTGGGAG GACGACAAGG GCAATATCCG CGTGCAGCGT
GGCTGGCGCG TCCAGAACAA CAACTCGATC GGGCCCTACA AGGGCGGCAT CCGCTTCCAC
CCGTCGGTGA CCGAGAGCGT CCTCAAATTC CTCGCCTTCG AGCAGACCTT CAAGAACGCG
CTGACCGGCC TGCCGATGGG CGGCGGCAAG GGCGGCTCCA ACTTCAACCC GAAGGGCAAG
AGCACCAACG AGGTGATGCG CTTCTGCCAG AGCTTCGTGA ACGAGCTCTA TCGCCACATC
GGCGCGGACA CCGACGTCCC CGCCGGCGAC ATCGGCGTGG GCGGCCGCGA GATCGGCTAC
ATGTTCGGCC AGTACAAGCG CCTGACCAAC GAGTTCACCG GCGTGCTGAC CGGCAAGGGC
CTCGAATATG GCGGCTCGCT GATCCGTACC GAGGCGACCG GCTATGGCGC GGTCTACTTC
CTGCACGAAA TGCTCAAGAC CAAGGGCAAG GACCTGGTCG GCCTCAACGC CGTCATCTCG
GGGTCGGGCA ATGTCGCCAC CCATGCGGCC GAGAAGATCA ACCAGCTCGG CGGCAAGGTG
CTGACCCTGT CGGACTCGGA AGGCTTCATC TACGATCCGG AGGGCATCAC CCAGGACAAG
GTCAACTGGG TCAAGGACCT CAAGACCCGC AAGCGCGGCC GCATCTCCGA ATATGTGAAG
GAGTTCAAGG GCTCCGAGTT CCATGGCAAC GGCGCCCGCC CGTGGGGCGT CGAGTGCGAC
GTGGCGGTGC CCTGCGCGAC CCAGAACGAG CTGAACGAGG AAGAGGCGAA GACGCTGGTC
AAGAACGGCT GCTTCGCGGT CTCGGAAGGC GCCAACATGC CGACCACCCT CGAAGGCACC
CATGTCTTCA AGAAGGCCAA GATCCTGTTC GCTCCGGGCA AGGCCGCCAA TGCCGGCGGC
GTCGCGGTGT CCGGCCTCGA GATGAGCCAG AACTCGGCGC GCATCTCGTG GAAGGAAGAG
GAGCTGCAGC GCCTGCTGGT CGACATCATG CAGGGCATCC ATGCGCGCTG CGTCGAATAT
GGCGGCTCCG CCGGGACCGA CCATGTCGAC TATGTGAAGG GCGCCAACAT CGCCGGCTTC
AAGAAGGTGG CCGACGCGAT GCTCGCCTAT GGCGTGGTCT GA
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| Protein sequence | MAVSDHVDLA SFVEGVKKRN PGQPEFVQAV TEVAEDIFDF IADKEEYHKY QILRRIAEPD
RVISFRVCWE DDKGNIRVQR GWRVQNNNSI GPYKGGIRFH PSVTESVLKF LAFEQTFKNA
LTGLPMGGGK GGSNFNPKGK STNEVMRFCQ SFVNELYRHI GADTDVPAGD IGVGGREIGY
MFGQYKRLTN EFTGVLTGKG LEYGGSLIRT EATGYGAVYF LHEMLKTKGK DLVGLNAVIS
GSGNVATHAA EKINQLGGKV LTLSDSEGFI YDPEGITQDK VNWVKDLKTR KRGRISEYVK
EFKGSEFHGN GARPWGVECD VAVPCATQNE LNEEEAKTLV KNGCFAVSEG ANMPTTLEGT
HVFKKAKILF APGKAANAGG VAVSGLEMSQ NSARISWKEE ELQRLLVDIM QGIHARCVEY
GGSAGTDHVD YVKGANIAGF KKVADAMLAY GVV
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