| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1302 |
|---|
| Symbol | |
|---|
| ID | 5200530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 1458505 |
|---|
| End bp | 1459623 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640580849 |
|---|
| Product | AFG1 family ATPase |
|---|
| Protein accession | YP_001261805 |
|---|
| Protein GI | 148554223 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1485] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCG TCGTCGCCCG CTACGAGGAA CTGGTCGCCG CCGGCGAGCT GCGCCCGGAC
CCCGACCAGC GCGCCACCGT CGAACGGCTC AACGCCCTGG CGCTGGCGCT GGAGGAGCAG
CCGGCCAAGG GCAGCGTGCT GTGGCGGATG CTGCGCAAGG CGCCGCCGCC GGTGCGCGGC
CTCTACATGT GGGGCGGGGT CGGCCGCGGC AAGTCGATGC TGATGGACCT GTTCTACGAC
TGCGTCCGGA TCGGCGCGAA GCGGCGCGTC CATTTCCACG AGTTCATGAT CGAGGTGCAC
GAGCGGCTGC GGGTCGAGCG CGCCAAGGAG AAGGGCGATC CGATCCCGCC GGTGGTCGAG
GCGATCGCCG CCGAGGCGAA GCTGCTCGCC TTCGACGAGA TGGTCGTCAA CAACATGGCC
GACGCGGCGA TCCTCAGCCG GTTGTTCACC GGGCTGATCG TCGACGCCGG GGTGACGGTG
GTGACGACCT CCAACCGGCC GCCGCGCGAT CTCTACAAGG ACGGGCTCAA CCGGCAGCTC
TTCCTGCCCT TCATCGACCT GATCGAGGCT CGTCTCGACG TGCTGTCGCT CAACGGGCCG
ACCGACTATC GGCTCGAACG GCTGGGCGGC ATGCCGGTCT GGTACGCGCC GAACGGCCCG
GCCGCGACCG CGGCGGTGTC GGAGGCTTTC TTCCGGCTGA CCGACTATCC GCCCGAGGAC
CGCGCGCACG TCCCGACCGC CGACATCGCG GTGCCGGGCG GGCGCACCCT GCACGTGCCC
AAGAGCCTGA AGGGCGTCGC GGTCTTCTCG TTCAAGCGGC TCTGCGCCGA GGCGCGGGGC
GCCGCCGACT ATCTGGCGAT CGCGCGCAAC TATCACACCG TGATCATCGT CGGCATTCCC
CTGCTGACGC CCGAGAAGCG CAACGAGGCG GCCCGCTTCA AGGTGCTGAT CGACGCGCTC
TACGAACATA AGGTCAAGCT GCTGGCCGCC GCCGACGCCG AGCCCGAGGC GCTCTATCCC
GACGGCGACG GCGCCTTCGA GTTCGAGCGC ACCGTCTCGC GGCTGATGGA GATGCGCAGC
CAGGACTATC TCGCCGCCGG CCACGGCTTG GAGGAATAG
|
|---|
| Protein sequence | MTGVVARYEE LVAAGELRPD PDQRATVERL NALALALEEQ PAKGSVLWRM LRKAPPPVRG
LYMWGGVGRG KSMLMDLFYD CVRIGAKRRV HFHEFMIEVH ERLRVERAKE KGDPIPPVVE
AIAAEAKLLA FDEMVVNNMA DAAILSRLFT GLIVDAGVTV VTTSNRPPRD LYKDGLNRQL
FLPFIDLIEA RLDVLSLNGP TDYRLERLGG MPVWYAPNGP AATAAVSEAF FRLTDYPPED
RAHVPTADIA VPGGRTLHVP KSLKGVAVFS FKRLCAEARG AADYLAIARN YHTVIIVGIP
LLTPEKRNEA ARFKVLIDAL YEHKVKLLAA ADAEPEALYP DGDGAFEFER TVSRLMEMRS
QDYLAAGHGL EE
|
|---|
| |