Gene Swit_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1252 
Symbol 
ID5198131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1408751 
End bp1409677 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID640580799 
Producthypothetical protein 
Protein accessionYP_001261755 
Protein GI148554173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.330438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CGCCGGCCAT GGCCCCGCCC GTCTTCCTGG TCGCGGCACC GCGATCGGGC 
TGCGTGGCGT TGCGCCAGTT GCTGGACCGG CACCCGGCGG TGGCGATCGC CCCCGACATC
GACTTCCTCG TCGACGCGAT CACCCCCGAC GGACGCTTCA TGAAGCGCGA CGCCTTCGTC
CGGTCGGTCG AGTTCGACAG CCGGTTCAGG ACGCTGGGGC TGACCGTTCC CACCGGCCTG
CCCTTCACCG GCATCGCCCG CGCGCTGCTC GACCAGCTCA CCGCGAAGCC CGGCGCGACC
GTGACCGGGG CGACGATCCG GCATCATTTC GACCGCATCC TGTGGCTGTG GCCCGACGCG
CGCTTCATCC ACCTCGTTCG CGACGGGCGG GACGTCGCCG CCGCCCATGT CCACCGCCGC
GAGGCGGGCA ATCTGTGGCA CGGCGTCGCC GATTGGGTCG AGGTCGAGAC GTTGTGGGAC
CGAATGTCGC ACAAATTGCC GCCGGACCGG CAGTTCACCC TGAAATATGA GATGCTCGCC
GGCGAACCCG AATATGAGCT GCGCCGCCTG TGCGAGTTCC TGCGGGTGCC GTTCGCGCCG
GCGATGCTCC AGCCGCCGGT GGCGCTCGAC CAGGAACCGG CGGGCCGCTG GCGCAAGGCC
GACACGCGCG AGATCTCGGC GGCGGAGCAC AGCGCCGCGC GCTGGCTGCT CCAGAACGGC
TATTTCCTGA GCGGGACGGT CCGGCCGCCG TCGATGCTGC GCCGCGCCGC GTTCGGCATC
CAGAACAAGC TCGTCCTCGC CAACCATCGC CGCGAGCGGC TCGGCACCGG GCTGTGGCTC
AAGGCCGGGC TGGTCGCGAA GCTCGGCGGC CGCAAGGCCA GGGCGCGGAT GAAGCGCCGC
CAGTACGACA TCCTGTCGAG GGATTGA
 
Protein sequence
MATAPAMAPP VFLVAAPRSG CVALRQLLDR HPAVAIAPDI DFLVDAITPD GRFMKRDAFV 
RSVEFDSRFR TLGLTVPTGL PFTGIARALL DQLTAKPGAT VTGATIRHHF DRILWLWPDA
RFIHLVRDGR DVAAAHVHRR EAGNLWHGVA DWVEVETLWD RMSHKLPPDR QFTLKYEMLA
GEPEYELRRL CEFLRVPFAP AMLQPPVALD QEPAGRWRKA DTREISAAEH SAARWLLQNG
YFLSGTVRPP SMLRRAAFGI QNKLVLANHR RERLGTGLWL KAGLVAKLGG RKARARMKRR
QYDILSRD